Literature DB >> 3714489

RNA 2 of tobacco rattle virus strain TCM encodes an unexpected gene.

G C Angenent, H J Linthorst, A F van Belkum, B J Cornelissen, J F Bol.   

Abstract

The sequence of the 3'-terminal 1210 nucleotides of RNA 1 and the complete sequence of 3389 nucleotides of RNA 2 of tobacco rattle virus (TRV) strain TCM has been deduced. The sequence of the 3'-terminal 1099 nucleotides of RNAs 1 and 2 was found to be identical. Thus the genome of this TRV strain is partially diploid, encoding a 16K protein in both RNA 1 and RNA 2. The sequence that is unique to RNA 2 contains two open reading frames: the coat protein cistron and a cistron for a 29.1K protein, which shows no homology with the RNA 1 encoded 28.8K protein. cDNA probes corresponding to these two open reading frames cross-hybridized to pea early-browning virus RNA 2, but not to RNA 2 of five other tobraviruses tested.

Entities:  

Mesh：

Substances：

Year:  1986        PMID： 3714489      PMCID： PMC311473          DOI： 10.1093/nar/14.11.4673

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  16 in total

1.  Studies on sequence homology between the RNA's of alfalfa mosaic virus.

Authors:  J F Bol; F T Brederode; G C Janze; D K Rauh
Journal:  Virology       Date:  1975-05       Impact factor: 3.616

2.  Translation of tobacco rattle virus RNA in vitro using wheat germ extracts.

Authors:  M A Mayo; C Fritsch; L Hirth
Journal:  Virology       Date:  1976-02       Impact factor: 3.616

3.  Further studies on the translation products of tobacco rattle virus RNA in vitro.

Authors:  C Fritsch; M A Mayo; L Hirth
Journal:  Virology       Date:  1977-04       Impact factor: 3.616

4.  Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing.

Authors:  S Henikoff
Journal:  Gene       Date:  1984-06       Impact factor: 3.688

5.  New versatile cloning and sequencing vectors based on bacteriophage M13.

Authors:  M P Kieny; R Lathe; J P Lecocq
Journal:  Gene       Date:  1983-12       Impact factor: 3.688

6.  New M13 vectors for cloning.

Authors:  J Messing
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

7.  Mapping adenines, guanines, and pyrimidines in RNA.

Authors:  H Donis-Keller; A M Maxam; W Gilbert
Journal:  Nucleic Acids Res       Date:  1977-08       Impact factor: 16.971

8.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

9.  Analysis of the genome structure of tobacco rattle virus strain PSG.

Authors:  B J Cornelissen; H J Linthorst; F T Brederode; J F Bol
Journal:  Nucleic Acids Res       Date:  1986-03-11       Impact factor: 16.971

10.  The organisation and interviral homologies of genes at the 3' end of tobacco rattle virus RNA1.

Authors:  M Boccara; W D Hamilton; D C Baulcombe
Journal:  EMBO J       Date:  1986-02       Impact factor: 11.598
View more
  16 in total

1.  Genetic recombination in brome mosaic virus: effect of sequence and replication of RNA on accumulation of recombinants.

Authors:  P D Nagy; J J Bujarski
Journal:  J Virol       Date:  1992-11       Impact factor: 5.103

2.  The complete nucleotide sequence of PEBV RNA2 reveals the presence of a novel open reading frame and provides insights into the structure of tobraviral subgenomic promoters.

Authors:  M G Goulden; G P Lomonossoff; J W Davies; K R Wood
Journal:  Nucleic Acids Res       Date:  1990-08-11       Impact factor: 16.971

3.  Heterologous virus-induced gene silencing as a promising approach in plant functional genomics.

Authors:  Seied Ali Hosseini Tafreshi; Mansour Shariati; Mohammad Reza Mofid; Mojtaba Khayam Nekui; Abolghasem Esmaeili
Journal:  Mol Biol Rep       Date:  2011-06-08       Impact factor: 2.316

Review 4.  Gene expression from viral RNA genomes.

Authors:  I G Maia; K Séron; A L Haenni; F Bernardi
Journal:  Plant Mol Biol       Date:  1996-10       Impact factor: 4.076

5.  Unique RNA 2 sequences of two Brazilian isolates of Pepper ringspot virus, a tobravirus.

Authors:  Adriana Ribeiro Silva Batista; Cícero Nicolini; Kelly Barreto Rodrigues; Fernando Lucas Melo; Raquel Medeiros Vasques; Mônica Alves de Macêdo; Alice Kazuko Inoue-Nagata; Tatsuya Nagata
Journal:  Virus Genes       Date:  2014-04-23       Impact factor: 2.332

6.  Analysis of RNA2 of pea early browning virus strain SP5.

Authors:  S G Petersen; J Lehmbeck; B Borkhardt
Journal:  Plant Mol Biol       Date:  1989-12       Impact factor: 4.076

7.  tRNA-like properties of tobacco rattle virus RNA.

Authors:  A van Belkum; B Cornelissen; H Linthorst; J Bol; C Pley; L Bosch
Journal:  Nucleic Acids Res       Date:  1987-04-10       Impact factor: 16.971

8.  Serial passage of tobacco rattle virus under different selection conditions results in deletion of structural and nonstructural genes in RNA 2.

Authors:  C Hernandez; J E Carette; D J Brown; J F Bol
Journal:  J Virol       Date:  1996-08       Impact factor: 5.103

9.  A phylogenetically conserved sequence within viral 3' untranslated RNA pseudoknots regulates translation.

Authors:  V Leathers; R Tanguay; M Kobayashi; D R Gallie
Journal:  Mol Cell Biol       Date:  1993-09       Impact factor: 4.272

10.  A new 'sense' RNA approach to block viral RNA replication in vitro.

Authors:  M D Morch; R L Joshi; T M Denial; A L Haenni
Journal:  Nucleic Acids Res       Date:  1987-05-26       Impact factor: 16.971
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.