Literature DB >> 8980488

Gene expression from viral RNA genomes.

I G Maia1, K Séron, A L Haenni, F Bernardi.   

Abstract

This review is centered on the major strategies used by plant RNA viruses to produce the proteins required for virus multiplication. The strategies at the level of transcription presented here are synthesis of mRNA or subgenomic RNAs from viral RNA templates, and 'cap-snatching'. At the level of translation, several strategies have been evolved by viruses at the steps of initiation, elongation and termination. At the initiation step, the classical scanning mode is the most frequent strategy employed by viruses; however in a vast number of cases, leaky scanning of the initiation complex allows expression of more than one protein from the same RNA sequence. During elongation, frameshift allows the formation of two proteins differing in their carboxy terminus. At the termination step, suppression of termination produces a protein with an elongated carboxy terminus. The last strategy that will be described is co- and/or post-translational cleavage of a polyprotein precursor by virally encoded proteinases. Most (+)-stranded RNA viruses utilize a combination of various strategies.

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Year:  1996        PMID: 8980488     DOI: 10.1007/bf00039391

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  190 in total

1.  Sequence polymorphism in the 5'NTR and in the P1 coding region of potato virus Y genomic RNA.

Authors:  V M Tordo; A M Chachulska; H Fakhfakh; M Le Romancer; C Robaglia; S Astier-Manifacier
Journal:  J Gen Virol       Date:  1995-04       Impact factor: 3.891

2.  The 35-kDa protein from the N-terminus of the potyviral polyprotein functions as a third virus-encoded proteinase.

Authors:  J Verchot; E V Koonin; J C Carrington
Journal:  Virology       Date:  1991-12       Impact factor: 3.616

3.  Origin of the small component of brome mosaic virus RNA.

Authors:  D S Shih; L C Lane; P Kaesberg
Journal:  J Mol Biol       Date:  1972-03-14       Impact factor: 5.469

4.  Non-canonical translation mechanisms in plants: efficient in vitro and in planta initiation at AUU codons of the tobacco mosaic virus enhancer sequence.

Authors:  J Schmitz; D Prüfer; W Rohde; E Tacke
Journal:  Nucleic Acids Res       Date:  1996-01-15       Impact factor: 16.971

5.  Readthrough protein associated with virions of barley yellow dwarf luteovirus and its potential role in regulating the efficiency of aphid transmission.

Authors:  J Y Wang; C Chay; F E Gildow; S M Gray
Journal:  Virology       Date:  1995-02-01       Impact factor: 3.616

6.  Nucleotide sequence and genomic organization of apple chlorotic leaf spot closterovirus.

Authors:  S German; T Candresse; M Lanneau; J C Huet; J C Pernollet; J Dunez
Journal:  Virology       Date:  1990-11       Impact factor: 3.616

7.  Characterization of sequences controlling the synthesis of alfalfa mosaic virus subgenomic RNA in vivo.

Authors:  E A van der Vossen; T Notenboom; J F Bol
Journal:  Virology       Date:  1995-10-01       Impact factor: 3.616

8.  The complete nucleotide sequence of tobacco rattle virus RNA-1.

Authors:  W D Hamilton; M Boccara; D J Robinson; D C Baulcombe
Journal:  J Gen Virol       Date:  1987-10       Impact factor: 3.891

9.  The complete nucleotide sequence of potato virus X and its homologies at the amino acid level with various plus-stranded RNA viruses.

Authors:  M J Huisman; H J Linthorst; J F Bol; J C Cornelissen
Journal:  J Gen Virol       Date:  1988-08       Impact factor: 3.891

10.  Aphid transmission of beet western yellows luteovirus requires the minor capsid read-through protein P74.

Authors:  V Brault; J F van den Heuvel; M Verbeek; V Ziegler-Graff; A Reutenauer; E Herrbach; J C Garaud; H Guilley; K Richards; G Jonard
Journal:  EMBO J       Date:  1995-02-15       Impact factor: 11.598

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  23 in total

1.  Subgenomic mRNA regulation by a distal RNA element in a (+)-strand RNA virus.

Authors:  G Zhang; V Slowinski; K A White
Journal:  RNA       Date:  1999-04       Impact factor: 4.942

Review 2.  Misreading of termination codons in eukaryotes by natural nonsense suppressor tRNAs.

Authors:  H Beier; M Grimm
Journal:  Nucleic Acids Res       Date:  2001-12-01       Impact factor: 16.971

3.  Sequence-divergent units of the ABA-1 polyprotein array of the nematode Ascaris suum have similar fatty-acid- and retinol-binding properties but different binding-site environments.

Authors:  J Moore; L McDermott; N C Price; S M Kelly; A Cooper; M W Kennedy
Journal:  Biochem J       Date:  1999-05-15       Impact factor: 3.857

4.  Characterization of a novel 5' subgenomic RNA3a derived from RNA3 of Brome mosaic bromovirus.

Authors:  Rafal Wierzchoslawski; Anna Urbanowicz; Aleksandra Dzianott; Marek Figlerowicz; Jozef J Bujarski
Journal:  J Virol       Date:  2006-09-27       Impact factor: 5.103

5.  Initiation at the third in-frame AUG codon of open reading frame 3 of the hepatitis E virus is essential for viral infectivity in vivo.

Authors:  Y W Huang; T Opriessnig; P G Halbur; X J Meng
Journal:  J Virol       Date:  2007-01-03       Impact factor: 5.103

6.  Generation of subgenomic RNA directed by a satellite RNA associated with bamboo mosaic potexvirus: analyses of potexvirus subgenomic RNA promoter.

Authors:  Y S Lee; Y H Hsu; N S Lin
Journal:  J Virol       Date:  2000-11       Impact factor: 5.103

7.  A positive-strand RNA virus with three very different subgenomic RNA promoters.

Authors:  G Koev; W A Miller
Journal:  J Virol       Date:  2000-07       Impact factor: 5.103

8.  Uncoupled expression of p33 and p92 permits amplification of tomato bushy stunt virus RNAs.

Authors:  S K Oster; B Wu; K A White
Journal:  J Virol       Date:  1998-07       Impact factor: 5.103

9.  Effects of modification of the transcription initiation site context on citrus tristeza virus subgenomic RNA synthesis.

Authors:  María A Ayllón; Siddarame Gowda; Tatineni Satyanarayana; Alexander V Karasev; Scott Adkins; Munir Mawassi; José Guerri; Pedro Moreno; William O Dawson
Journal:  J Virol       Date:  2003-09       Impact factor: 5.103

10.  Structural characterization of an intermolecular RNA-RNA interaction involved in the transcription regulation element of a bipartite plant virus.

Authors:  Richard H Guenther; Tim L Sit; Hanna S Gracz; Michael A Dolan; Hannah L Townsend; Guihua Liu; Winnell H Newman; Paul F Agris; Steven A Lommel
Journal:  Nucleic Acids Res       Date:  2004-05-20       Impact factor: 16.971

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