Literature DB >> 3681997

Structural studies of mutants of the lysozyme of bacteriophage T4. The temperature-sensitive mutant protein Thr157----Ile.

M G Grütter1, T M Gray, L H Weaver, T A Wilson, B W Matthews.   

Abstract

To understand the roles of individual amino acids in the folding and stability of globular proteins, a systematic structural analysis of mutants of the lysozyme of bacteriophage T4 has been undertaken. The isolation, characterization, crystallographic refinement and structural analysis of a temperature-sensitive lysozyme in which threonine 157 is replaced by isoleucine is reported here. This mutation reduces the temperature of the midpoint of the reversible thermal denaturation transition by 11 deg.C at pH 2.0. Electron density maps showing differences between the wild-type and mutant X-ray crystal structures have obvious features corresponding to the substitution of threonine 157 by isoleucine. There is little difference electron density in the remainder of the molecule, indicating that the structural changes are localized to the site of the mutation. High-resolution crystallographic refinement of the mutant lysozyme structure confirms that it is very similar to wild-type lysozyme. The largest conformational differences are in the gamma-carbon of residue 157 and in the side-chain of Asp159, which shift 1.0 A and 1.1 A, respectively. In the wild-type enzyme, the gamma-hydroxyl group of Thr157 participates in a network of hydrogen bonds. Substitution of Thr157 with an isoleucine disrupts this set of hydrogen bonds. A water molecule bound in the vicinity of Thr155 partially restores the hydrogen bond network in the mutant structure, but the buried main-chain amide of Asp159 is not near a hydrogen bond acceptor. This unsatisfied hydrogen-bonding potential is the most obvious reason for the reduction in stability of the temperature-sensitive mutant protein.

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Year:  1987        PMID: 3681997     DOI: 10.1016/0022-2836(87)90126-4

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  9 in total

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Authors:  D A D'Argenio; M W Vetting; D H Ohlendorf; L N Ornston
Journal:  J Bacteriol       Date:  1999-10       Impact factor: 3.490

2.  A test of proposed rules for helix capping: implications for protein design.

Authors:  Martin Sagermann; Lars-Göran Mårtensson; Walter A Baase; Brian W Matthews
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

3.  Structural and functional analysis of temperature-sensitive mutants of the phage phi 29 DNA polymerase.

Authors:  M A Blasco; L Blanco; E Parés; M Salas; A Bernad
Journal:  Nucleic Acids Res       Date:  1990-08-25       Impact factor: 16.971

4.  S434F in NrdE generates the thermosensitive phenotype of corynebacterium ammoniagenes CH31 and enhances thermolability by increasing the surface hydrophobicity of the NrdE(Ts) protein.

Authors:  Hesham M Elhariry; Jochen Meens; Matthias Stehr; Georg Auling
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

5.  Neutron crystallographic studies of T4 lysozyme at cryogenic temperature.

Authors:  Le Li; Shantanu Shukla; Flora Meilleur; Robert F Standaert; Josh Pierce; Dean A A Myles; Matthew J Cuneo
Journal:  Protein Sci       Date:  2017-09-06       Impact factor: 6.725

6.  Destabilizing effect of proline substitutions in two helical regions of T4 lysozyme: leucine 66 to proline and leucine 91 to proline.

Authors:  T M Gray; E J Arnoys; S Blankespoor; T Born; R Jagar; R Everman; D Plowman; A Stair; D Zhang
Journal:  Protein Sci       Date:  1996-04       Impact factor: 6.725

7.  Multiple alanine replacements within alpha-helix 126-134 of T4 lysozyme have independent, additive effects on both structure and stability.

Authors:  X J Zhang; W A Baase; B W Matthews
Journal:  Protein Sci       Date:  1992-06       Impact factor: 6.725

8.  Isolation and characterization of mutations in the HXK2 gene of Saccharomyces cerevisiae.

Authors:  H Ma; L M Bloom; Z M Zhu; C T Walsh; D Botstein
Journal:  Mol Cell Biol       Date:  1989-12       Impact factor: 4.272

9.  3D deep convolutional neural networks for amino acid environment similarity analysis.

Authors:  Wen Torng; Russ B Altman
Journal:  BMC Bioinformatics       Date:  2017-06-14       Impact factor: 3.169

  9 in total

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