| Literature DB >> 36140813 |
Mengyu Lim1, Alessandro Carollo2, Dagmara Dimitriou3, Gianluca Esposito2.
Abstract
Genetic research in Autism Spectrum Disorder (ASD) has progressed tremendously in recent decades. Dozens of genetic loci and hundreds of alterations in the genetic sequence, expression, epigenetic transformation, and interactions with other physiological and environmental systems have been found to increase the likelihood of developing ASD. There is therefore a need to represent this wide-ranging yet voluminous body of literature in a systematic manner so that this information can be synthesised and understood at a macro level. Therefore, this study made use of scientometric methods, particularly document co-citation analysis (DCA), to systematically review literature on ASD genetic research from 2018 to 2022. A total of 14,818 articles were extracted from Scopus and analyzed with CiteSpace. An optimized DCA analysis revealed that recent literature on ASD genetic research can be broadly organised into 12 major clusters representing various sub-topics. These clusters are briefly described in the manuscript and potential applications of this study are discussed.Entities:
Keywords: ASD; Autism Spectrum Disorder; CiteSpace; autism; genetics; scientometrics
Mesh:
Year: 2022 PMID: 36140813 PMCID: PMC9498399 DOI: 10.3390/genes13091646
Source DB: PubMed Journal: Genes (Basel) ISSN: 2073-4425 Impact factor: 4.141
Figure 1Study flow diagram (adapted from [33]).
Figure 2Network of publications generated through the Document Co-Citation Analysis (DCA) on the literature about the genetics of autism from 2018 to 2022. The major clusters are highlighted and divided by color.
Details of the 12 major clusters identified with the document co-citation analysis (DCA). Log-Likelihood Ratio (LLR) label is automatically generated by the software.
| Cluster ID | Size | Silhouette | Mean Publication Year | LLR Label | Suggested Label |
|---|---|---|---|---|---|
| 0 | 218 | 0.823 | 2018 | Intellectual Disability | Networks and Pathways |
| 1 | 158 | 0.920 | 2019 | Gut Microbiota | Gut Microbiota |
| 2 | 132 | 0.850 | 2018 | Mouse Model | Fragile X Syndrome |
| 3 | 120 | 0.885 | 2018 | Mutant Mice | SHANK1,2,3 Genes |
| 4 | 119 | 0.831 | 2018 | Valproic Acid | Valproic Acid |
| 5 | 110 | 0.919 | 2019 | Genomic Architecture | Genomic Architecture |
| 6 | 106 | 0.825 | 2019 | Brain Organoid | Brain Organoid |
| 7 | 102 | 0.893 | 2020 | Psychiatric Disorder | Psychiatric Disorder |
| 8 | 72 | 0.905 | 2019 | Sex Difference | Sex Difference |
| 9 | 59 | 0.911 | 2018 | Autism Spectrum Disorder | Copy Number Variations (CNVs) |
| 10 | 49 | 0.985 | 2019 | Autistic Adult | Developmental Perspectives |
| 14 | 4 | 1.000 | 2020 | Antiseizure Drug | Antiseizure Drug |
Identifying characteristics of 20 documents with higher citation burtness metric generated in the document co-citation analysis (DCA).
| Reference | Citation Burstness | Publication Year | Burst Begin | Burst End | Duration | Betweenness Centrality | Sigma |
|---|---|---|---|---|---|---|---|
| Lord et al. [ | 14.357 | 2018 | 2020 | 2022 | 2 | 0.0010 | 1.01 |
| Grove et al. [ | 9.462 | 2019 | 2020 | 2022 | 2 | 0.0128 | 1.13 |
| Iakoucheva et al. [ | 8.080 | 2019 | 2020 | 2022 | 2 | 0.0001 | 1.00 |
| Sharon et al. [ | 7.827 | 2019 | 2020 | 2022 | 2 | 0.0066 | 1.05 |
| Ruzzo et al. [ | 7.389 | 2019 | 2020 | 2022 | 2 | 0.0100 | 1.08 |
| Kim et al. [ | 7.172 | 2011 | 2018 | 2019 | 1 | 0.0000 | 1.00 |
| Abraham et al. [ | 6.816 | 2017 | 2020 | 2022 | 2 | 0.0031 | 1.02 |
| Lim et al. [ | 6.702 | 2017 | 2019 | 2020 | 1 | 0.0003 | 1.00 |
| Yang et al. [ | 6.693 | 2012 | 2018 | 2019 | 1 | 0.0013 | 1.01 |
| Lee et al. [ | 6.311 | 2019 | 2020 | 2022 | 2 | 0.0006 | 1.00 |
| Nowakowski et al. [ | 6.311 | 2017 | 2020 | 2022 | 2 | 0.0068 | 1.04 |
| Velmeshev et al. [ | 6.311 | 2019 | 2020 | 2022 | 2 | 0.0013 | 1.01 |
| Matta et al. [ | 6.311 | 2019 | 2020 | 2022 | 2 | 0.0011 | 1.01 |
| Estes and McAllister [ | 6.214 | 2015 | 2018 | 2019 | 1 | 0.0020 | 1.01 |
| Goines and Ashwood [ | 6.058 | 2013 | 2020 | 2022 | 2 | 0.0011 | 1.01 |
| Pantelis et al. [ | 6.058 | 2014 | 2020 | 2022 | 2 | 0.0004 | 1.00 |
| Yuen et al. [ | 5.975 | 2015 | 2018 | 2019 | 1 | 0.0008 | 1.01 |
| Antoine et al. [ | 5.909 | 2019 | 2020 | 2022 | 2 | 0.0074 | 1.04 |
| Schafer et al. [ | 5.805 | 2019 | 2020 | 2022 | 2 | 0.0031 | 1.02 |
| Stahl et al. [ | 5.805 | 2019 | 2020 | 2022 | 2 | 0.0019 | 1.01 |
Top 10 citing papers in Cluster #0 identified using DCA.
| Title | Coverage | Global Citing Score |
|---|---|---|
| Joensuu et al. [ | 57 | 37 |
| Gandhi and Lee [ | 52 | 9 |
| Guang et al. [ | 47 | 98 |
| Garcia-Forn et al. [ | 45 | 8 |
| Hui et al. [ | 44 | 8 |
| Diaz-Caneja et al. [ | 44 | 11 |
| Alonso-Gonzalez et al. [ | 40 | 25 |
| DiCarlo and Wallace [ | 40 | 2 |
| Eyring and Geschwind [ | 39 | 5 |
| Iakoucheva et al. [ | 39 | 94 |
Top 10 citing papers in Cluster #1 identified using DCA.
| Title | Coverage | Global Citing Score |
|---|---|---|
| Guang et al. [ | 38 | 98 |
| Patel et al. [ | 37 | 9 |
| Yang and Shcheglovitov [ | 33 | 10 |
| Panisi et al. [ | 30 | 21 |
| Matta et al. [ | 27 | 78 |
| Zheng et al. [ | 26 | 8 |
| DiCarlo and Wallace [ | 25 | 2 |
| Liu et al. [ | 25 | 11 |
| Lombardo et al. [ | 25 | 73 |
| Fattorusso et al. [ | 25 | 140 |
Top 10 citing papers in Cluster #2 identified using DCA.
| Title | Coverage | Global Citing Score |
|---|---|---|
| Wang et al. [ | 64 | 8 |
| Verma et al. [ | 46 | 23 |
| Gandhi and Lee [ | 43 | 9 |
| Joensuu et al. [ | 40 | 37 |
| Guang et al. [ | 34 | 98 |
| Sungur et al. [ | 34 | 12 |
| Bagni and Zukin [ | 33 | 109 |
| Chaudry and Vasudevan [ | 31 | 0 |
| Patel et al. [ | 31 | 9 |
| Möhrle et al. [ | 28 | 21 |
Top 10 citing papers in Cluster #3 identified using DCA.
| Title | Coverage | Global Citing Score |
|---|---|---|
| Wang et al. [ | 54 | 8 |
| Soler et al. [ | 40 | 26 |
| Mossa et al. [ | 35 | 19 |
| Yoo et al. [ | 35 | 22 |
| Ali Rodriguez et al. [ | 34 | 10 |
| Joensuu et al. [ | 33 | 37 |
| Sungur et al. [ | 31 | 12 |
| Yoo et al. [ | 29 | 15 |
| Yang and Shcheglovitov [ | 29 | 10 |
| Verma et al. [ | 29 | 23 |
Top 10 citing papers in Cluster #4 identified using DCA.
| Title | Coverage | Global Citing Score |
|---|---|---|
| St. Clair and Johnstone [ | 22 | 13 |
| Tartaglione et al. [ | 19 | 28 |
| Hui et al. [ | 18 | 8 |
| Filice et al. [ | 17 | 18 |
| Rylaarsdam and Guemez-Gamboa [ | 16 | 118 |
| Napolitano et al. [ | 16 | 0 |
| DiCarlo and Wallace [ | 14 | 2 |
| Fink and Levine [ | 14 | 14 |
| Patel et al. [ | 14 | 9 |
| Nakai et al. [ | 14 | 24 |
Top 10 citing papers in Cluster #6 identified using DCA.
| Title | Coverage | Global Citing Score |
|---|---|---|
| Lord et al. [ | 23 | 211 |
| Courchesne et al. [ | 15 | 40 |
| Hoffmann et al. [ | 15 | 14 |
| Ilieva et al. [ | 14 | 39 |
| Hong et al. [ | 12 | 31 |
| Chan et al. [ | 12 | 12 |
| Niu and Parent [ | 12 | 18 |
| Fetit et al. [ | 11 | 6 |
| Griesi-Oliveira et al. [ | 10 | 22 |
| Hui et al. [ | 10 | 8 |
Top 10 citing papers in Cluster #5 identified using DCA.
| Title | Coverage | Global Citing Score |
|---|---|---|
| Al-Dewik et al. [ | 20 | 5 |
| Culotta and Penzes [ | 18 | 12 |
| Breen et al. [ | 14 | 13 |
| Gordon and Geschwind [ | 13 | 7 |
| Prem et al. [ | 13 | 7 |
| Muhle et al. [ | 12 | 76 |
| Grabrucker [ | 14 | 2 |
| Saxena et al. [ | 12 | 5 |
| Scuderi and Verkhratsky [ | 11 | 8 |
| Fink and Levine [ | 11 | 14 |
Top 10 citing papers in Cluster #7 identified using DCA.
| Title | Coverage | Global Citing Score |
|---|---|---|
| Lord et al. [ | 18 | 211 |
| Park et al. [ | 16 | 23 |
| Jiang et al. [ | 15 | 0 |
| Urresti et al. [ | 12 | 11 |
| Walker et al. [ | 12 | 62 |
| Willsey et al. [ | 12 | 1 |
| Hoffmann et al. [ | 12 | 14 |
| Sullivan and Geschwind [ | 12 | 156 |
| Rees and Owen [ | 12 | 28 |
| Mullins et al. [ | 11 | 94 |
Top 10 citing papers in Cluster #8 identified using DCA.
| Title | Coverage | Global Citing Score |
|---|---|---|
| Rylaarsdam and Guemez-Gamboa [ | 11 | 118 |
| Lord et al. [ | 10 | 211 |
| Napolitano et al. [ | 9 | 0 |
| Rujeedawa and Zaman [ | 9 | 0 |
| Lai et al. [ | 8 | 53 |
| Kallitsounaki and Williams [ | 6 | 0 |
| Müller and Fishman [ | 6 | 47 |
| Wilson et al. [ | 6 | 7 |
| Howes et al. [ | 6 | 105 |
| Yuen et al. [ | 6 | 12 |
Top 10 citing papers in Cluster #9 identified using DCA.
| Title | Coverage | Global Citing Score |
|---|---|---|
| Jønch et al. [ | 11 | 19 |
| Egolf et al. [ | 11 | 14 |
| Deshpande and Weiss [ | 11 | 22 |
| Lengyel et al. [ | 10 | 1 |
| Takumi and Tamada [ | 9 | 55 |
| Rylaarsdam and Guemez-Gamboa [ | 9 | 118 |
| Kushima et al. [ | 8 | 114 |
| Bristow et al. [ | 7 | 11 |
| Pucilowska et al. [ | 7 | 39 |
| Campbell and Granato [ | 7 | 3 |
Top 10 citing papers in Cluster #10 identified using DCA.
| Title | Coverage | Global Citing Score |
|---|---|---|
| Zwaigenbaum et al. [ | 7 | 20 |
| Barros et al. [ | 6 | 2 |
| Al-Dewik et al. [ | 6 | 5 |
| Lacroix et al. [ | 6 | 1 |
| Kirst et al. [ | 5 | 0 |
| Hollin [ | 5 | 0 |
| Nebel et al. [ | 5 | 0 |
| Belcher et al. [ | 5 | 0 |
| Rozenblatt-Perkal and Zaidman-Zait [ | 5 | 1 |
| McCracken et al. [ | 5 | 5 |
Top 10 citing papers in Cluster #14 identified using DCA.
| Title | Coverage | Global Citing Score |
|---|---|---|
| Hakami [ | 4 | 2 |
| Hakami [ | 4 | 3 |
| Stamberger et al. [ | 3 | 10 |
| Hawkins et al. [ | 3 | 5 |
| Fan et al. [ | 2 | 4 |
| De Maria et al. [ | 2 | 4 |
| Crawford et al. [ | 2 | 5 |
| Galanopoulou et al. [ | 2 | 6 |
| Cali et al. [ | 2 | 0 |
| Raga et al. [ | 2 | 6 |