Literature DB >> 34313757

Three decades of ASD genetics: building a foundation for neurobiological understanding and treatment.

Katherine W Eyring1, Daniel H Geschwind1,2,3.   

Abstract

Methodological advances over the last three decades have led to a profound transformation in our understanding of the genetic origins of neuropsychiatric disorders. This is exemplified by the study of autism spectrum disorders (ASDs) for which microarrays, whole exome sequencing and whole genome sequencing have yielded over a hundred causal loci. Genome-wide association studies in ASD have also been fruitful, identifying 5 genome-wide significant loci thus far and demonstrating a substantial role for polygenic inherited risk. Approaches rooted in systems biology and functional genomics have increasingly placed genes implicated by risk variants into biological context. Genetic risk affects a finite group of cell-types and biological processes, converging primarily on early stages of brain development (though, the expression of many risk genes persists through childhood). Coupled with advances in stem cell-based human in vitro model systems, these findings provide a basis for developing mechanistic models of disease pathophysiology. Published by Oxford University Press 2021.

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Year:  2021        PMID: 34313757      PMCID: PMC8861370          DOI: 10.1093/hmg/ddab176

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  115 in total

Review 1.  Behavioral interventions in children and adolescents with autism spectrum disorder: a review of recent findings.

Authors:  Geraldine Dawson; Karen Burner
Journal:  Curr Opin Pediatr       Date:  2011-12       Impact factor: 2.856

2.  Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks.

Authors:  Elizabeth K Ruzzo; Laura Pérez-Cano; Jae-Yoon Jung; Lee-Kai Wang; Dorna Kashef-Haghighi; Chris Hartl; Chanpreet Singh; Jin Xu; Jackson N Hoekstra; Olivia Leventhal; Virpi M Leppä; Michael J Gandal; Kelley Paskov; Nate Stockham; Damon Polioudakis; Jennifer K Lowe; David A Prober; Daniel H Geschwind; Dennis P Wall
Journal:  Cell       Date:  2019-08-08       Impact factor: 41.582

3.  Genome-wide de novo risk score implicates promoter variation in autism spectrum disorder.

Authors:  Joon-Yong An; Kevin Lin; Lingxue Zhu; Donna M Werling; Shan Dong; Harrison Brand; Harold Z Wang; Xuefang Zhao; Grace B Schwartz; Ryan L Collins; Benjamin B Currall; Claudia Dastmalchi; Jeanselle Dea; Clif Duhn; Michael C Gilson; Lambertus Klei; Lindsay Liang; Eirene Markenscoff-Papadimitriou; Sirisha Pochareddy; Nadav Ahituv; Joseph D Buxbaum; Hilary Coon; Mark J Daly; Young Shin Kim; Gabor T Marth; Benjamin M Neale; Aaron R Quinlan; John L Rubenstein; Nenad Sestan; Matthew W State; A Jeremy Willsey; Michael E Talkowski; Bernie Devlin; Kathryn Roeder; Stephan J Sanders
Journal:  Science       Date:  2018-12-14       Impact factor: 47.728

4.  A genome-wide association study of shared risk across psychiatric disorders implicates gene regulation during fetal neurodevelopment.

Authors:  Andrew J Schork; Hyejung Won; Vivek Appadurai; Ron Nudel; Mike Gandal; Olivier Delaneau; Malene Revsbech Christiansen; David M Hougaard; Marie Bækved-Hansen; Jonas Bybjerg-Grauholm; Marianne Giørtz Pedersen; Esben Agerbo; Carsten Bøcker Pedersen; Benjamin M Neale; Mark J Daly; Naomi R Wray; Merete Nordentoft; Ole Mors; Anders D Børglum; Preben Bo Mortensen; Alfonso Buil; Wesley K Thompson; Daniel H Geschwind; Thomas Werge
Journal:  Nat Neurosci       Date:  2019-01-28       Impact factor: 24.884

5.  Patterns and rates of exonic de novo mutations in autism spectrum disorders.

Authors:  Benjamin M Neale; Yan Kou; Li Liu; Avi Ma'ayan; Kaitlin E Samocha; Aniko Sabo; Chiao-Feng Lin; Christine Stevens; Li-San Wang; Vladimir Makarov; Paz Polak; Seungtai Yoon; Jared Maguire; Emily L Crawford; Nicholas G Campbell; Evan T Geller; Otto Valladares; Chad Schafer; Han Liu; Tuo Zhao; Guiqing Cai; Jayon Lihm; Ruth Dannenfelser; Omar Jabado; Zuleyma Peralta; Uma Nagaswamy; Donna Muzny; Jeffrey G Reid; Irene Newsham; Yuanqing Wu; Lora Lewis; Yi Han; Benjamin F Voight; Elaine Lim; Elizabeth Rossin; Andrew Kirby; Jason Flannick; Menachem Fromer; Khalid Shakir; Tim Fennell; Kiran Garimella; Eric Banks; Ryan Poplin; Stacey Gabriel; Mark DePristo; Jack R Wimbish; Braden E Boone; Shawn E Levy; Catalina Betancur; Shamil Sunyaev; Eric Boerwinkle; Joseph D Buxbaum; Edwin H Cook; Bernie Devlin; Richard A Gibbs; Kathryn Roeder; Gerard D Schellenberg; James S Sutcliffe; Mark J Daly
Journal:  Nature       Date:  2012-04-04       Impact factor: 49.962

6.  Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.

Authors:  Brian J O'Roak; Laura Vives; Santhosh Girirajan; Emre Karakoc; Niklas Krumm; Bradley P Coe; Roie Levy; Arthur Ko; Choli Lee; Joshua D Smith; Emily H Turner; Ian B Stanaway; Benjamin Vernot; Maika Malig; Carl Baker; Beau Reilly; Joshua M Akey; Elhanan Borenstein; Mark J Rieder; Deborah A Nickerson; Raphael Bernier; Jay Shendure; Evan E Eichler
Journal:  Nature       Date:  2012-04-04       Impact factor: 49.962

7.  Neuronal defects in a human cellular model of 22q11.2 deletion syndrome.

Authors:  Themasap A Khan; Omer Revah; Aaron Gordon; Se-Jin Yoon; Anna K Krawisz; Carleton Goold; Yishan Sun; Chul Hoon Kim; Yuan Tian; Min-Yin Li; Julia M Schaepe; Kazuya Ikeda; Neal D Amin; Noriaki Sakai; Masayuki Yazawa; Leila Kushan; Seiji Nishino; Matthew H Porteus; Judith L Rapoport; Jonathan A Bernstein; Ruth O'Hara; Carrie E Bearden; Joachim F Hallmayer; John R Huguenard; Daniel H Geschwind; Ricardo E Dolmetsch; Sergiu P Paşca
Journal:  Nat Med       Date:  2020-09-28       Impact factor: 87.241

8.  Individual common variants exert weak effects on the risk for autism spectrum disorders.

Authors:  Richard Anney; Lambertus Klei; Dalila Pinto; Joana Almeida; Elena Bacchelli; Gillian Baird; Nadia Bolshakova; Sven Bölte; Patrick F Bolton; Thomas Bourgeron; Sean Brennan; Jessica Brian; Jillian Casey; Judith Conroy; Catarina Correia; Christina Corsello; Emily L Crawford; Maretha de Jonge; Richard Delorme; Eftichia Duketis; Frederico Duque; Annette Estes; Penny Farrar; Bridget A Fernandez; Susan E Folstein; Eric Fombonne; John Gilbert; Christopher Gillberg; Joseph T Glessner; Andrew Green; Jonathan Green; Stephen J Guter; Elizabeth A Heron; Richard Holt; Jennifer L Howe; Gillian Hughes; Vanessa Hus; Roberta Igliozzi; Suma Jacob; Graham P Kenny; Cecilia Kim; Alexander Kolevzon; Vlad Kustanovich; Clara M Lajonchere; Janine A Lamb; Miriam Law-Smith; Marion Leboyer; Ann Le Couteur; Bennett L Leventhal; Xiao-Qing Liu; Frances Lombard; Catherine Lord; Linda Lotspeich; Sabata C Lund; Tiago R Magalhaes; Carine Mantoulan; Christopher J McDougle; Nadine M Melhem; Alison Merikangas; Nancy J Minshew; Ghazala K Mirza; Jeff Munson; Carolyn Noakes; Gudrun Nygren; Katerina Papanikolaou; Alistair T Pagnamenta; Barbara Parrini; Tara Paton; Andrew Pickles; David J Posey; Fritz Poustka; Jiannis Ragoussis; Regina Regan; Wendy Roberts; Kathryn Roeder; Bernadette Roge; Michael L Rutter; Sabine Schlitt; Naisha Shah; Val C Sheffield; Latha Soorya; Inês Sousa; Vera Stoppioni; Nuala Sykes; Raffaella Tancredi; Ann P Thompson; Susanne Thomson; Ana Tryfon; John Tsiantis; Herman Van Engeland; John B Vincent; Fred Volkmar; J A S Vorstman; Simon Wallace; Kirsty Wing; Kerstin Wittemeyer; Shawn Wood; Danielle Zurawiecki; Lonnie Zwaigenbaum; Anthony J Bailey; Agatino Battaglia; Rita M Cantor; Hilary Coon; Michael L Cuccaro; Geraldine Dawson; Sean Ennis; Christine M Freitag; Daniel H Geschwind; Jonathan L Haines; Sabine M Klauck; William M McMahon; Elena Maestrini; Judith Miller; Anthony P Monaco; Stanley F Nelson; John I Nurnberger; Guiomar Oliveira; Jeremy R Parr; Margaret A Pericak-Vance; Joseph Piven; Gerard D Schellenberg; Stephen W Scherer; Astrid M Vicente; Thomas H Wassink; Ellen M Wijsman; Catalina Betancur; Joseph D Buxbaum; Edwin H Cook; Louise Gallagher; Michael Gill; Joachim Hallmayer; Andrew D Paterson; James S Sutcliffe; Peter Szatmari; Veronica J Vieland; Hakon Hakonarson; Bernie Devlin
Journal:  Hum Mol Genet       Date:  2012-07-26       Impact factor: 6.150

9.  De novo insertions and deletions of predominantly paternal origin are associated with autism spectrum disorder.

Authors:  Shan Dong; Michael F Walker; Nicholas J Carriero; Michael DiCola; A Jeremy Willsey; Adam Y Ye; Zainulabedin Waqar; Luis E Gonzalez; John D Overton; Stephanie Frahm; John F Keaney; Nicole A Teran; Jeanselle Dea; Jeffrey D Mandell; Vanessa Hus Bal; Catherine A Sullivan; Nicholas M DiLullo; Rehab O Khalil; Jake Gockley; Zafer Yuksel; Sinem M Sertel; A Gulhan Ercan-Sencicek; Abha R Gupta; Shrikant M Mane; Michael Sheldon; Andrew I Brooks; Kathryn Roeder; Bernie Devlin; Matthew W State; Liping Wei; Stephan J Sanders
Journal:  Cell Rep       Date:  2014-10-02       Impact factor: 9.995

10.  Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types.

Authors:  Hilary K Finucane; Yakir A Reshef; Verneri Anttila; Kamil Slowikowski; Alexander Gusev; Andrea Byrnes; Steven Gazal; Po-Ru Loh; Caleb Lareau; Noam Shoresh; Giulio Genovese; Arpiar Saunders; Evan Macosko; Samuela Pollack; John R B Perry; Jason D Buenrostro; Bradley E Bernstein; Soumya Raychaudhuri; Steven McCarroll; Benjamin M Neale; Alkes L Price
Journal:  Nat Genet       Date:  2018-04-09       Impact factor: 38.330

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  7 in total

1.  TAU ablation in excitatory neurons and postnatal TAU knockdown reduce epilepsy, SUDEP, and autism behaviors in a Dravet syndrome model.

Authors:  Eric Shao; Che-Wei Chang; Zhiyong Li; Xinxing Yu; Kaitlyn Ho; Michelle Zhang; Xin Wang; Jeffrey Simms; Iris Lo; Jessica Speckart; Julia Holtzman; Gui-Qiu Yu; Erik D Roberson; Lennart Mucke
Journal:  Sci Transl Med       Date:  2022-04-27       Impact factor: 19.319

Review 2.  Central Nervous System Pericytes Contribute to Health and Disease.

Authors:  Francesco Girolamo; Mariella Errede; Antonella Bizzoca; Daniela Virgintino; Domenico Ribatti
Journal:  Cells       Date:  2022-05-20       Impact factor: 7.666

3.  Role of the DUB enzyme USP7 in dendritic arborization, neuronal migration, and autistic-like behaviors in mice.

Authors:  Hui Qiao; Yuan Tian; Yuda Huo; Heng-Ye Man
Journal:  iScience       Date:  2022-06-14

4.  Superoxide dismutase isozymes in cerebral organoids from autism spectrum disorder patients.

Authors:  Morten Ejlersen; Mirolyuba Ilieva; Tanja Maria Michel
Journal:  J Neural Transm (Vienna)       Date:  2022-03-09       Impact factor: 3.850

5.  Autism Spectrum Disorders: Analysis of Mobile Elements at 7q11.23 Williams-Beuren Region by Comparative Genomics.

Authors:  Francesca Anna Cupaioli; Chiara Fallerini; Maria Antonietta Mencarelli; Valentina Perticaroli; Virginia Filippini; Francesca Mari; Alessandra Renieri; Alessandra Mezzelani
Journal:  Genes (Basel)       Date:  2021-10-12       Impact factor: 4.096

Review 6.  Recent Developments in Autism Genetic Research: A Scientometric Review from 2018 to 2022.

Authors:  Mengyu Lim; Alessandro Carollo; Dagmara Dimitriou; Gianluca Esposito
Journal:  Genes (Basel)       Date:  2022-09-14       Impact factor: 4.141

7.  Early postnatal serotonin modulation prevents adult-stage deficits in Arid1b-deficient mice through synaptic transcriptional reprogramming.

Authors:  Hyosang Kim; Doyoun Kim; Yisul Cho; Kyungdeok Kim; Junyeop Daniel Roh; Yangsik Kim; Esther Yang; Seong Soon Kim; Sunjoo Ahn; Hyun Kim; Hyojin Kang; Yongchul Bae; Eunjoon Kim
Journal:  Nat Commun       Date:  2022-08-27       Impact factor: 17.694

  7 in total

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