Literature DB >> 30804558

Identification of common genetic risk variants for autism spectrum disorder.

Jakob Grove1,2,3,4, Stephan Ripke5,6,7, Thomas D Als1,2,3, Manuel Mattheisen1,2,3,8,9, Raymond K Walters5,6, Hyejung Won10,11, Jonatan Pallesen1,2,3, Esben Agerbo1,12,13, Ole A Andreassen14,15, Richard Anney16, Swapnil Awashti7, Rich Belliveau6, Francesco Bettella14,15, Joseph D Buxbaum17,18,19,20, Jonas Bybjerg-Grauholm1,21, Marie Bækvad-Hansen1,21, Felecia Cerrato6, Kimberly Chambert6, Jane H Christensen1,2,3, Claire Churchhouse5,6,22, Karin Dellenvall23, Ditte Demontis1,2,3, Silvia De Rubeis17,18, Bernie Devlin24, Srdjan Djurovic14,25, Ashley L Dumont6, Jacqueline I Goldstein5,6,22, Christine S Hansen1,21,26, Mads Engel Hauberg1,2,3, Mads V Hollegaard1,21, Sigrun Hope14,27, Daniel P Howrigan5,6, Hailiang Huang5,6, Christina M Hultman23, Lambertus Klei24, Julian Maller6,28,29, Joanna Martin6,16,23, Alicia R Martin5,6,22, Jennifer L Moran6, Mette Nyegaard1,2,3, Terje Nærland14,30, Duncan S Palmer5,6, Aarno Palotie5,6,22,31, Carsten Bøcker Pedersen1,12,13, Marianne Giørtz Pedersen1,12,13, Timothy dPoterba5,6,22, Jesper Buchhave Poulsen1,21, Beate St Pourcain32,33,34, Per Qvist1,2,3, Karola Rehnström35, Abraham Reichenberg17,18,19, Jennifer Reichert17,18, Elise B Robinson5,6,36, Kathryn Roeder37,38, Panos Roussos18,39,40,41, Evald Saemundsen42, Sven Sandin17,18,23, F Kyle Satterstrom5,6,22, George Davey Smith33,43, Hreinn Stefansson44, Stacy Steinberg44, Christine R Stevens6, Patrick F Sullivan10,23,45, Patrick Turley5,6, G Bragi Walters44,46, Xinyi Xu17,18, Kari Stefansson44,46, Daniel H Geschwind47,48,49, Merete Nordentoft1,50, David M Hougaard1,21, Thomas Werge1,26,51, Ole Mors1,52, Preben Bo Mortensen1,2,12,13, Benjamin M Neale5,6,22, Mark J Daly53,54,55,56, Anders D Børglum57,58,59.   

Abstract

Autism spectrum disorder (ASD) is a highly heritable and heterogeneous group of neurodevelopmental phenotypes diagnosed in more than 1% of children. Common genetic variants contribute substantially to ASD susceptibility, but to date no individual variants have been robustly associated with ASD. With a marked sample-size increase from a unique Danish population resource, we report a genome-wide association meta-analysis of 18,381 individuals with ASD and 27,969 controls that identified five genome-wide-significant loci. Leveraging GWAS results from three phenotypes with significantly overlapping genetic architectures (schizophrenia, major depression, and educational attainment), we identified seven additional loci shared with other traits at equally strict significance levels. Dissecting the polygenic architecture, we found both quantitative and qualitative polygenic heterogeneity across ASD subtypes. These results highlight biological insights, particularly relating to neuronal function and corticogenesis, and establish that GWAS performed at scale will be much more productive in the near term in ASD.

Entities:  

Mesh:

Year:  2019        PMID: 30804558      PMCID: PMC6454898          DOI: 10.1038/s41588-019-0344-8

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  110 in total

Review 1.  Do common variants play a role in risk for autism? Evidence and theoretical musings.

Authors:  Bernie Devlin; Nadine Melhem; Kathryn Roeder
Journal:  Brain Res       Date:  2010-11-12       Impact factor: 3.252

2.  A genome-wide association study of autism reveals a common novel risk locus at 5p14.1.

Authors:  Deqiong Ma; Daria Salyakina; James M Jaworski; Ioanna Konidari; Patrice L Whitehead; Ashley N Andersen; Joshua D Hoffman; Susan H Slifer; Dale J Hedges; Holly N Cukier; Anthony J Griswold; Jacob L McCauley; Gary W Beecham; Harry H Wright; Ruth K Abramson; Eden R Martin; John P Hussman; John R Gilbert; Michael L Cuccaro; Jonathan L Haines; Margaret A Pericak-Vance
Journal:  Ann Hum Genet       Date:  2009-05       Impact factor: 1.670

3.  Validity of childhood autism in the Danish Psychiatric Central Register: findings from a cohort sample born 1990-1999.

Authors:  Marlene B Lauritsen; Meta Jørgensen; Kreesten M Madsen; Sanne Lemcke; Susanne Toft; Jakob Grove; Diana E Schendel; Poul Thorsen
Journal:  J Autism Dev Disord       Date:  2009-09-01

4.  The contribution of de novo coding mutations to autism spectrum disorder.

Authors:  Ivan Iossifov; Brian J O'Roak; Stephan J Sanders; Michael Ronemus; Niklas Krumm; Dan Levy; Holly A Stessman; Kali T Witherspoon; Laura Vives; Karynne E Patterson; Joshua D Smith; Bryan Paeper; Deborah A Nickerson; Jeanselle Dea; Shan Dong; Luis E Gonzalez; Jeffrey D Mandell; Shrikant M Mane; Michael T Murtha; Catherine A Sullivan; Michael F Walker; Zainulabedin Waqar; Liping Wei; A Jeremy Willsey; Boris Yamrom; Yoon-ha Lee; Ewa Grabowska; Ertugrul Dalkic; Zihua Wang; Steven Marks; Peter Andrews; Anthony Leotta; Jude Kendall; Inessa Hakker; Julie Rosenbaum; Beicong Ma; Linda Rodgers; Jennifer Troge; Giuseppe Narzisi; Seungtai Yoon; Michael C Schatz; Kenny Ye; W Richard McCombie; Jay Shendure; Evan E Eichler; Matthew W State; Michael Wigler
Journal:  Nature       Date:  2014-10-29       Impact factor: 69.504

5.  Excess of rare, inherited truncating mutations in autism.

Authors:  Niklas Krumm; Tychele N Turner; Carl Baker; Laura Vives; Kiana Mohajeri; Kali Witherspoon; Archana Raja; Bradley P Coe; Holly A Stessman; Zong-Xiao He; Suzanne M Leal; Raphael Bernier; Evan E Eichler
Journal:  Nat Genet       Date:  2015-05-11       Impact factor: 38.330

6.  Synaptic, transcriptional and chromatin genes disrupted in autism.

Authors:  Silvia De Rubeis; Xin He; Arthur P Goldberg; Christopher S Poultney; Kaitlin Samocha; A Erucment Cicek; Yan Kou; Li Liu; Menachem Fromer; Susan Walker; Tarinder Singh; Lambertus Klei; Jack Kosmicki; Fu Shih-Chen; Branko Aleksic; Monica Biscaldi; Patrick F Bolton; Jessica M Brownfeld; Jinlu Cai; Nicholas G Campbell; Angel Carracedo; Maria H Chahrour; Andreas G Chiocchetti; Hilary Coon; Emily L Crawford; Sarah R Curran; Geraldine Dawson; Eftichia Duketis; Bridget A Fernandez; Louise Gallagher; Evan Geller; Stephen J Guter; R Sean Hill; Juliana Ionita-Laza; Patricia Jimenz Gonzalez; Helena Kilpinen; Sabine M Klauck; Alexander Kolevzon; Irene Lee; Irene Lei; Jing Lei; Terho Lehtimäki; Chiao-Feng Lin; Avi Ma'ayan; Christian R Marshall; Alison L McInnes; Benjamin Neale; Michael J Owen; Noriio Ozaki; Mara Parellada; Jeremy R Parr; Shaun Purcell; Kaija Puura; Deepthi Rajagopalan; Karola Rehnström; Abraham Reichenberg; Aniko Sabo; Michael Sachse; Stephan J Sanders; Chad Schafer; Martin Schulte-Rüther; David Skuse; Christine Stevens; Peter Szatmari; Kristiina Tammimies; Otto Valladares; Annette Voran; Wang Li-San; Lauren A Weiss; A Jeremy Willsey; Timothy W Yu; Ryan K C Yuen; Edwin H Cook; Christine M Freitag; Michael Gill; Christina M Hultman; Thomas Lehner; Aaarno Palotie; Gerard D Schellenberg; Pamela Sklar; Matthew W State; James S Sutcliffe; Christiopher A Walsh; Stephen W Scherer; Michael E Zwick; Jeffrey C Barett; David J Cutler; Kathryn Roeder; Bernie Devlin; Mark J Daly; Joseph D Buxbaum
Journal:  Nature       Date:  2014-10-29       Impact factor: 49.962

7.  Most genetic risk for autism resides with common variation.

Authors:  Trent Gaugler; Lambertus Klei; Stephan J Sanders; Corneliu A Bodea; Arthur P Goldberg; Ann B Lee; Milind Mahajan; Dina Manaa; Yudi Pawitan; Jennifer Reichert; Stephan Ripke; Sven Sandin; Pamela Sklar; Oscar Svantesson; Abraham Reichenberg; Christina M Hultman; Bernie Devlin; Kathryn Roeder; Joseph D Buxbaum
Journal:  Nat Genet       Date:  2014-07-20       Impact factor: 38.330

8.  The iPSYCH2012 case-cohort sample: new directions for unravelling genetic and environmental architectures of severe mental disorders.

Authors:  C B Pedersen; J Bybjerg-Grauholm; M G Pedersen; J Grove; E Agerbo; M Bækvad-Hansen; J B Poulsen; C S Hansen; J J McGrath; T D Als; J I Goldstein; B M Neale; M J Daly; D M Hougaard; O Mors; M Nordentoft; A D Børglum; T Werge; P B Mortensen
Journal:  Mol Psychiatry       Date:  2017-09-19       Impact factor: 15.992

9.  Multi-trait analysis of genome-wide association summary statistics using MTAG.

Authors:  Patrick Turley; Raymond K Walters; Omeed Maghzian; Aysu Okbay; James J Lee; Mark Alan Fontana; Tuan Anh Nguyen-Viet; Robbee Wedow; Meghan Zacher; Nicholas A Furlotte; Patrik Magnusson; Sven Oskarsson; Magnus Johannesson; Peter M Visscher; David Laibson; David Cesarini; Benjamin M Neale; Daniel J Benjamin
Journal:  Nat Genet       Date:  2018-01-01       Impact factor: 38.330

10.  Individual common variants exert weak effects on the risk for autism spectrum disorders.

Authors:  Richard Anney; Lambertus Klei; Dalila Pinto; Joana Almeida; Elena Bacchelli; Gillian Baird; Nadia Bolshakova; Sven Bölte; Patrick F Bolton; Thomas Bourgeron; Sean Brennan; Jessica Brian; Jillian Casey; Judith Conroy; Catarina Correia; Christina Corsello; Emily L Crawford; Maretha de Jonge; Richard Delorme; Eftichia Duketis; Frederico Duque; Annette Estes; Penny Farrar; Bridget A Fernandez; Susan E Folstein; Eric Fombonne; John Gilbert; Christopher Gillberg; Joseph T Glessner; Andrew Green; Jonathan Green; Stephen J Guter; Elizabeth A Heron; Richard Holt; Jennifer L Howe; Gillian Hughes; Vanessa Hus; Roberta Igliozzi; Suma Jacob; Graham P Kenny; Cecilia Kim; Alexander Kolevzon; Vlad Kustanovich; Clara M Lajonchere; Janine A Lamb; Miriam Law-Smith; Marion Leboyer; Ann Le Couteur; Bennett L Leventhal; Xiao-Qing Liu; Frances Lombard; Catherine Lord; Linda Lotspeich; Sabata C Lund; Tiago R Magalhaes; Carine Mantoulan; Christopher J McDougle; Nadine M Melhem; Alison Merikangas; Nancy J Minshew; Ghazala K Mirza; Jeff Munson; Carolyn Noakes; Gudrun Nygren; Katerina Papanikolaou; Alistair T Pagnamenta; Barbara Parrini; Tara Paton; Andrew Pickles; David J Posey; Fritz Poustka; Jiannis Ragoussis; Regina Regan; Wendy Roberts; Kathryn Roeder; Bernadette Roge; Michael L Rutter; Sabine Schlitt; Naisha Shah; Val C Sheffield; Latha Soorya; Inês Sousa; Vera Stoppioni; Nuala Sykes; Raffaella Tancredi; Ann P Thompson; Susanne Thomson; Ana Tryfon; John Tsiantis; Herman Van Engeland; John B Vincent; Fred Volkmar; J A S Vorstman; Simon Wallace; Kirsty Wing; Kerstin Wittemeyer; Shawn Wood; Danielle Zurawiecki; Lonnie Zwaigenbaum; Anthony J Bailey; Agatino Battaglia; Rita M Cantor; Hilary Coon; Michael L Cuccaro; Geraldine Dawson; Sean Ennis; Christine M Freitag; Daniel H Geschwind; Jonathan L Haines; Sabine M Klauck; William M McMahon; Elena Maestrini; Judith Miller; Anthony P Monaco; Stanley F Nelson; John I Nurnberger; Guiomar Oliveira; Jeremy R Parr; Margaret A Pericak-Vance; Joseph Piven; Gerard D Schellenberg; Stephen W Scherer; Astrid M Vicente; Thomas H Wassink; Ellen M Wijsman; Catalina Betancur; Joseph D Buxbaum; Edwin H Cook; Louise Gallagher; Michael Gill; Joachim Hallmayer; Andrew D Paterson; James S Sutcliffe; Peter Szatmari; Veronica J Vieland; Hakon Hakonarson; Bernie Devlin
Journal:  Hum Mol Genet       Date:  2012-07-26       Impact factor: 6.150

View more
  466 in total

1.  Recent genetic and functional insights in autism spectrum disorder.

Authors:  Moe Nakanishi; Matthew P Anderson; Toru Takumi
Journal:  Curr Opin Neurol       Date:  2019-08       Impact factor: 5.710

Review 2.  Integration of CRISPR-engineering and hiPSC-based models of psychiatric genomics.

Authors:  Marliette R Matos; Seok-Man Ho; Nadine Schrode; Kristen J Brennand
Journal:  Mol Cell Neurosci       Date:  2020-07-23       Impact factor: 4.314

Review 3.  Prenatal Origins of ASD: The When, What, and How of ASD Development.

Authors:  Eric Courchesne; Vahid H Gazestani; Nathan E Lewis
Journal:  Trends Neurosci       Date:  2020-04-15       Impact factor: 13.837

4.  Causal influences of neuroticism on mental health and cardiovascular disease.

Authors:  Fuquan Zhang; Ancha Baranova; Chao Zhou; Hongbao Cao; Jiu Chen; Xiangrong Zhang; Mingqing Xu
Journal:  Hum Genet       Date:  2021-05-11       Impact factor: 4.132

5.  SynGO: An Evidence-Based, Expert-Curated Knowledge Base for the Synapse.

Authors:  Frank Koopmans; Pim van Nierop; Maria Andres-Alonso; Andrea Byrnes; Tony Cijsouw; Marcelo P Coba; L Niels Cornelisse; Ryan J Farrell; Hana L Goldschmidt; Daniel P Howrigan; Natasha K Hussain; Cordelia Imig; Arthur P H de Jong; Hwajin Jung; Mahdokht Kohansalnodehi; Barbara Kramarz; Noa Lipstein; Ruth C Lovering; Harold MacGillavry; Vittoria Mariano; Huaiyu Mi; Momchil Ninov; David Osumi-Sutherland; Rainer Pielot; Karl-Heinz Smalla; Haiming Tang; Katherine Tashman; Ruud F G Toonen; Chiara Verpelli; Rita Reig-Viader; Kyoko Watanabe; Jan van Weering; Tilmann Achsel; Ghazaleh Ashrafi; Nimra Asi; Tyler C Brown; Pietro De Camilli; Marc Feuermann; Rebecca E Foulger; Pascale Gaudet; Anoushka Joglekar; Alexandros Kanellopoulos; Robert Malenka; Roger A Nicoll; Camila Pulido; Jaime de Juan-Sanz; Morgan Sheng; Thomas C Südhof; Hagen U Tilgner; Claudia Bagni; Àlex Bayés; Thomas Biederer; Nils Brose; John Jia En Chua; Daniela C Dieterich; Eckart D Gundelfinger; Casper Hoogenraad; Richard L Huganir; Reinhard Jahn; Pascal S Kaeser; Eunjoon Kim; Michael R Kreutz; Peter S McPherson; Ben M Neale; Vincent O'Connor; Danielle Posthuma; Timothy A Ryan; Carlo Sala; Guoping Feng; Steven E Hyman; Paul D Thomas; August B Smit; Matthijs Verhage
Journal:  Neuron       Date:  2019-06-03       Impact factor: 17.173

Review 6.  How genome-wide association studies (GWAS) made traditional candidate gene studies obsolete.

Authors:  Laramie E Duncan; Michael Ostacher; Jacob Ballon
Journal:  Neuropsychopharmacology       Date:  2019-04-14       Impact factor: 7.853

7.  Attitudes on pharmacogenetic testing in psychiatric patients with treatment-resistant depression.

Authors:  Michael J McCarthy; Yucui Chen; Anna Demodena; Eileen Fisher; Shahrokh Golshan; Trisha Suppes; John R Kelsoe
Journal:  Depress Anxiety       Date:  2020-07-15       Impact factor: 6.505

8.  Identifying 5 Common Psychiatric Disorders Associated Chemicals Through Integrative Analysis of Genome-Wide Association Study and Chemical-Gene Interaction Datasets.

Authors:  Shiqiang Cheng; Yan Wen; Mei Ma; Lu Zhang; Li Liu; Xin Qi; Bolun Cheng; Chujun Liang; Ping Li; Om Prakash Kafle; Feng Zhang
Journal:  Schizophr Bull       Date:  2020-04-15       Impact factor: 9.306

9.  Targeting Gamma-Related Pathophysiology in Autism Spectrum Disorder Using Transcranial Electrical Stimulation: Opportunities and Challenges.

Authors:  Fae B Kayarian; Ali Jannati; Alexander Rotenberg; Emiliano Santarnecchi
Journal:  Autism Res       Date:  2020-05-28       Impact factor: 5.216

10.  Copy Number Variants and Polygenic Risk Scores Predict Need of Care in Autism and/or ADHD Families.

Authors:  Sonja LaBianca; Jette LaBianca; Anne Katrine Pagsberg; Klaus Damgaard Jakobsen; Vivek Appadurai; Alfonso Buil; Thomas Werge
Journal:  J Autism Dev Disord       Date:  2021-01
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.