Literature DB >> 35980575

Prime Editing for Precise Genome Engineering in Drosophila.

Justin A Bosch1, Norbert Perrimon2,3.   

Abstract

Editing the Drosophila genome is incredibly useful for gene functional analysis. However, compared to gene knockouts, precise gene editing is difficult to achieve. Prime editing, a recently described CRISPR/Cas9-based technique, has the potential to make precise editing simpler and faster, and produce less errors than traditional methods. Initially described in mammalian cells, prime editing is functional in Drosophila somatic and germ cells. Here, we outline steps to design, generate, and express prime editing components in transgenic flies. Furthermore, we highlight a crossing scheme to produce edited fly stocks in less than 3 months.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  CRISPR; Drosophila; Genome engineering; Precise editing; Prime editing; pegRNA

Mesh:

Year:  2022        PMID: 35980575     DOI: 10.1007/978-1-0716-2541-5_5

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  23 in total

1.  High-efficiency prime editing with optimized, paired pegRNAs in plants.

Authors:  Qiupeng Lin; Shuai Jin; Yuan Zong; Hong Yu; Zixu Zhu; Guanwen Liu; Liquan Kou; Yanpeng Wang; Jin-Long Qiu; Jiayang Li; Caixia Gao
Journal:  Nat Biotechnol       Date:  2021-03-25       Impact factor: 54.908

2.  Predicting the efficiency of prime editing guide RNAs in human cells.

Authors:  Hui Kwon Kim; Goosang Yu; Jinman Park; Seonwoo Min; Sungtae Lee; Sungroh Yoon; Hyongbum Henry Kim
Journal:  Nat Biotechnol       Date:  2020-09-21       Impact factor: 54.908

3.  Precise genome engineering in Drosophila using prime editing.

Authors:  Justin A Bosch; Gabriel Birchak; Norbert Perrimon
Journal:  Proc Natl Acad Sci U S A       Date:  2021-01-05       Impact factor: 11.205

Review 4.  Base editing: precision chemistry on the genome and transcriptome of living cells.

Authors:  Holly A Rees; David R Liu
Journal:  Nat Rev Genet       Date:  2018-12       Impact factor: 53.242

5.  Genome-wide specificity of prime editors in plants.

Authors:  Shuai Jin; Qiupeng Lin; Yingfeng Luo; Zixu Zhu; Guanwen Liu; Yunjia Li; Kunling Chen; Jin-Long Qiu; Caixia Gao
Journal:  Nat Biotechnol       Date:  2021-04-15       Impact factor: 54.908

6.  Unbiased investigation of specificities of prime editing systems in human cells.

Authors:  Do Yon Kim; Su Bin Moon; Jeong-Heon Ko; Yong-Sam Kim; Daesik Kim
Journal:  Nucleic Acids Res       Date:  2020-10-09       Impact factor: 16.971

7.  PrimeDesign software for rapid and simplified design of prime editing guide RNAs.

Authors:  Jonathan Y Hsu; Julian Grünewald; Regan Szalay; Justine Shih; Andrew V Anzalone; Kin Chung Lam; Max W Shen; Karl Petri; David R Liu; J Keith Joung; Luca Pinello
Journal:  Nat Commun       Date:  2021-02-15       Impact factor: 14.919

Review 8.  Prime editing - an update on the field.

Authors:  Janine Scholefield; Patrick T Harrison
Journal:  Gene Ther       Date:  2021-05-24       Impact factor: 5.250

9.  Curly Encodes Dual Oxidase, Which Acts with Heme Peroxidase Curly Su to Shape the Adult Drosophila Wing.

Authors:  Thomas Ryan Hurd; Feng-Xia Liang; Ruth Lehmann
Journal:  PLoS Genet       Date:  2015-11-20       Impact factor: 5.917

10.  Search-and-replace genome editing without double-strand breaks or donor DNA.

Authors:  Andrew V Anzalone; Peyton B Randolph; Jessie R Davis; Alexander A Sousa; Luke W Koblan; Jonathan M Levy; Peter J Chen; Christopher Wilson; Gregory A Newby; Aditya Raguram; David R Liu
Journal:  Nature       Date:  2019-10-21       Impact factor: 69.504

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