Literature DB >> 35891979

Spatial Multivariate Trees for Big Data Bayesian Regression.

Michele Peruzzi1, David B Dunson1.   

Abstract

High resolution geospatial data are challenging because standard geostatistical models based on Gaussian processes are known to not scale to large data sizes. While progress has been made towards methods that can be computed more efficiently, considerably less attention has been devoted to methods for large scale data that allow the description of complex relationships between several outcomes recorded at high resolutions by different sensors. Our Bayesian multivariate regression models based on spatial multivariate trees (SpamTrees) achieve scalability via conditional independence assumptions on latent random effects following a treed directed acyclic graph. Information-theoretic arguments and considerations on computational efficiency guide the construction of the tree and the related efficient sampling algorithms in imbalanced multivariate settings. In addition to simulated data examples, we illustrate SpamTrees using a large climate data set which combines satellite data with land-based station data. Software and source code are available on CRAN at https://CRAN.R-project.org/package=spamtree.

Entities:  

Keywords:  Directed acyclic graph; Gaussian process; Geostatistics; Markov chain Monte Carlo; Multiscale/multiresolution; Multivariate regression

Year:  2022        PMID: 35891979      PMCID: PMC9311452     

Source DB:  PubMed          Journal:  J Mach Learn Res        ISSN: 1532-4435            Impact factor:   5.177


  13 in total

1.  Adaptive Gaussian Predictive Process Models for Large Spatial Datasets.

Authors:  Rajarshi Guhaniyogi; Andrew O Finley; Sudipto Banerjee; Alan E Gelfand
Journal:  Environmetrics       Date:  2011-12       Impact factor: 1.900

2.  Fast Direct Methods for Gaussian Processes.

Authors:  Sivaram Ambikasaran; Daniel Foreman-Mackey; Leslie Greengard; David W Hogg; Michael O'Neil
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2016-02       Impact factor: 6.226

3.  Scaling Multidimensional Inference for Structured Gaussian Processes.

Authors:  Elad Gilboa; Yunus Saatçi; John P Cunningham
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2015-02       Impact factor: 6.226

4.  NONSEPARABLE DYNAMIC NEAREST NEIGHBOR GAUSSIAN PROCESS MODELS FOR LARGE SPATIO-TEMPORAL DATA WITH AN APPLICATION TO PARTICULATE MATTER ANALYSIS.

Authors:  Abhirup Datta; Sudipto Banerjee; Andrew O Finley; Nicholas A S Hamm; Martijn Schaap
Journal:  Ann Appl Stat       Date:  2016-09-28       Impact factor: 2.083

5.  Hierarchical Spatial Process Models for Multiple Traits in Large Genetic Trials.

Authors:  Sudipto Banerjee; Andrew O Finley; Patrik Waldmann; Tore Ericsson
Journal:  J Am Stat Assoc       Date:  2010-06-01       Impact factor: 5.033

6.  Highly Scalable Bayesian Geostatistical Modeling via Meshed Gaussian Processes on Partitioned Domains.

Authors:  Michele Peruzzi; Sudipto Banerjee; Andrew O Finley
Journal:  J Am Stat Assoc       Date:  2020-11-24       Impact factor: 4.369

7.  Hierarchical Nearest-Neighbor Gaussian Process Models for Large Geostatistical Datasets.

Authors:  Abhirup Datta; Sudipto Banerjee; Andrew O Finley; Alan E Gelfand
Journal:  J Am Stat Assoc       Date:  2016-08-18       Impact factor: 5.033

8.  Efficient algorithms for Bayesian Nearest Neighbor Gaussian Processes.

Authors:  Andrew O Finley; Abhirup Datta; Bruce C Cook; Douglas C Morton; Hans E Andersen; Sudipto Banerjee
Journal:  J Comput Graph Stat       Date:  2019-04-01       Impact factor: 2.302

9.  Gaussian predictive process models for large spatial data sets.

Authors:  Sudipto Banerjee; Alan E Gelfand; Andrew O Finley; Huiyan Sang
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2008-09-01       Impact factor: 4.488

10.  A Case Study Competition Among Methods for Analyzing Large Spatial Data.

Authors:  Matthew J Heaton; Abhirup Datta; Andrew O Finley; Reinhard Furrer; Joseph Guinness; Rajarshi Guhaniyogi; Florian Gerber; Robert B Gramacy; Dorit Hammerling; Matthias Katzfuss; Finn Lindgren; Douglas W Nychka; Furong Sun; Andrew Zammit-Mangion
Journal:  J Agric Biol Environ Stat       Date:  2018-12-14       Impact factor: 1.524

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