Literature DB >> 35773584

Production and Preparation of Isotopically Labeled Human Membrane Proteins in Pichia pastoris for Fast-MAS-NMR Analyses.

Lina Barret1,2, Tobias Schubeis2, Valérie Kugler1, Lucile Guyot1,3, Guido Pintacuda2, Renaud Wagner4.   

Abstract

Membrane proteins (MPs) comprise about one-third of the human proteome, playing critical roles in many physiological processes and associated disorders. Consistently, they represent one of the largest classes of targets for the pharmaceutical industry. Their study at the molecular level is however particularly challenging, resulting in a severe lack of structural and dynamic information that is hindering their detailed functional characterization and the identification of novel potent drug candidates.Magic Angle Spinning (MAS) NMR is a reliable and efficient method for the determination of protein structures and dynamics and for the identification of ligand binding sites and equilibria. MAS-NMR is particularly well suited for MPs since they can be directly analysed in a native-like lipid bilayer environment but used to require aggravating large amounts of isotope enriched material. The frequent toxicity of human MP overexpression in bacterial cultures poses an additional hurdle, resulting in the need for alternative (and often more costly) expression systems. The recent development of very fast (up to 150 kHz) MAS probes has revolutionized the field of biomolecular solid-state NMR enabling higher spectral resolution with significant reduction of the required sample, rendering eukaryotic expression systems cost-effective.Here is presented a set of accessible procedures validated for the production and preparation of eukaryotic MPs for Fast-MAS 1H-detected NMR analysis. The methodology is illustrated with the human copper uptake protein hCTR1 recombinantly produced and 13C-15N uniformly labeled with the versatile and affordable Pichia pastoris system. Subsequent purification procedures allow the recovery of mg amounts that are then reconstituted into liposome formulations compatible with solid-state NMR handling and analysis.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Isotopic labeling; MAS-NMR; Membrane protein; Multilamellar vesicles; Pichia pastoris; Yeast

Mesh:

Substances:

Year:  2022        PMID: 35773584     DOI: 10.1007/978-1-0716-2368-8_11

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  51 in total

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Authors:  Yifan Cheng
Journal:  Curr Opin Struct Biol       Date:  2018-09-13       Impact factor: 6.809

2.  Expanding the horizons for structural analysis of fully protonated protein assemblies by NMR spectroscopy at MAS frequencies above 100 kHz.

Authors:  Jochem Struppe; Caitlin M Quinn; Manman Lu; Mingzhang Wang; Guangjin Hou; Xingyu Lu; Jodi Kraus; Loren B Andreas; Jan Stanek; Daniela Lalli; Anne Lesage; Guido Pintacuda; Werner Maas; Angela M Gronenborn; Tatyana Polenova
Journal:  Solid State Nucl Magn Reson       Date:  2017-07-03       Impact factor: 2.293

Review 3.  High-resolution proton-detected NMR of proteins at very fast MAS.

Authors:  Loren B Andreas; Tanguy Le Marchand; Kristaps Jaudzems; Guido Pintacuda
Journal:  J Magn Reson       Date:  2015-04       Impact factor: 2.229

Review 4.  Membrane protein dynamics studied by X-ray lasers - or why only time will tell.

Authors:  Jörg Standfuss
Journal:  Curr Opin Struct Biol       Date:  2019-03-09       Impact factor: 6.809

Review 5.  The role of NMR spectroscopy in mapping the conformational landscape of GPCRs.

Authors:  Mark J Bostock; Andras S Solt; Daniel Nietlispach
Journal:  Curr Opin Struct Biol       Date:  2019-05-07       Impact factor: 6.809

Review 6.  Structural biology and structure-function relationships of membrane proteins.

Authors:  Rosana Reis; Isabel Moraes
Journal:  Biochem Soc Trans       Date:  2018-12-17       Impact factor: 5.407

7.  Structural and molecular basis of cross-seeding barriers in amyloids.

Authors:  Asen Daskalov; Denis Martinez; Virginie Coustou; Nadia El Mammeri; Mélanie Berbon; Loren B Andreas; Benjamin Bardiaux; Jan Stanek; Abdelmajid Noubhani; Brice Kauffmann; Joseph S Wall; Guido Pintacuda; Sven J Saupe; Birgit Habenstein; Antoine Loquet
Journal:  Proc Natl Acad Sci U S A       Date:  2021-01-05       Impact factor: 11.205

Review 8.  Structure and Dynamics of Membrane Proteins from Solid-State NMR.

Authors:  Venkata S Mandala; Jonathan K Williams; Mei Hong
Journal:  Annu Rev Biophys       Date:  2018-03-02       Impact factor: 12.981

Review 9.  Advances in high-speed atomic force microscopy (HS-AFM) reveal dynamics of transmembrane channels and transporters.

Authors:  George R Heath; Simon Scheuring
Journal:  Curr Opin Struct Biol       Date:  2019-03-14       Impact factor: 6.809

10.  Proton-Based Structural Analysis of a Heptahelical Transmembrane Protein in Lipid Bilayers.

Authors:  Daniela Lalli; Matthew N Idso; Loren B Andreas; Sunyia Hussain; Naomi Baxter; Songi Han; Bradley F Chmelka; Guido Pintacuda
Journal:  J Am Chem Soc       Date:  2017-08-11       Impact factor: 15.419

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