Literature DB >> 35668215

Hymenobacter cyanobacteriorum sp. nov., isolated from a freshwater reservoir during the cyanobacterial bloom period.

Ve Van Le1,2, So-Ra Ko1, Mingyeong Kang1,2, Hee-Mock Oh1,2, Chi-Yong Ahn3,4.   

Abstract

A Gram-negative, red-colored, and rod-shaped bacterial strain, DH14T, was isolated from a eutrophic reservoir. The 16S rRNA gene sequence analysis showed that strain DH14T was most closely related to Hymenobacter terrigena (98.3% similarity) and Hymenobacter terrae (98.1%). The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between strain DH14T and its related type strains were below 82.9% and 27.2%, respectively. Strain DH14T contained iso-C15:0 (32.6%), anteiso-C15:0 (14.0%), and summed feature 3 (C16:1 ω6c and/or C16:1 ω7c) (25.8%) as major cellular fatty acids. The main polar lipids were phosphatidylethanolamine, two unidentified aminophospholipids, and one unidentified lipid. The respiratory quinone was menaquinone 7 (MK-7). The genomic DNA G + C content was 62.1%. These evidences support the classification of strain DH14T as a novel species in the genus Hymenobacter, for which the name Hymenobacter cyanobacteriorum sp. nov. is proposed. The type strain is DH14T (= KCTC 92040T = LMG 32425T).
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  16S rRNA gene; Cyanobacterial bloom; Hymenobacter; Polyphasic taxonomy

Mesh:

Substances:

Year:  2022        PMID: 35668215     DOI: 10.1007/s00203-022-02992-w

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.667


  28 in total

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3.  The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities.

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Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

4.  Evolutionary trees from DNA sequences: a maximum likelihood approach.

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Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

5.  Comparative Genomic Study of Polar Lichen-Associated Hymenobacter sp. PAMC 26554 and Hymenobacter sp. PAMC 26628 Reveals the Presence of Polysaccharide-Degrading Ability Based on Habitat.

Authors:  Nisha Ghimire; So-Ra Han; Byeollee Kim; Hyun Park; Jun Hyuck Lee; Tae-Jin Oh
Journal:  Curr Microbiol       Date:  2020-07-17       Impact factor: 2.188

6.  Proposal of Hymenobacter norwichensis sp. nov., classification of 'Taxeobacter ocellatus', 'Taxeobacter gelupurpurascens' and 'Taxeobacter chitinovorans' as Hymenobacter ocellatus sp. nov., Hymenobacter gelipurpurascens sp. nov. and Hymenobacter chitinivorans sp. nov., respectively, and emended description of the genus Hymenobacter Hirsch et al. 1999.

Authors:  Sandra Buczolits; Ewald B M Denner; Peter Kämpfer; Hans-Jürgen Busse
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Journal:  Int J Syst Evol Microbiol       Date:  2017-05-05       Impact factor: 2.747

9.  Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison.

Authors:  Alexander F Auch; Mathias von Jan; Hans-Peter Klenk; Markus Göker
Journal:  Stand Genomic Sci       Date:  2010-01-28

10.  Hymenobacter wooponensis sp. nov., isolated from wetland freshwater.

Authors:  Joo Won Kang; Ji Hee Lee; Keun Sik Baik; Sang Suk Lee; Chi Nam Seong
Journal:  Int J Syst Evol Microbiol       Date:  2015-03-12       Impact factor: 2.747

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