Literature DB >> 16957101

Proposal of Hymenobacter norwichensis sp. nov., classification of 'Taxeobacter ocellatus', 'Taxeobacter gelupurpurascens' and 'Taxeobacter chitinovorans' as Hymenobacter ocellatus sp. nov., Hymenobacter gelipurpurascens sp. nov. and Hymenobacter chitinivorans sp. nov., respectively, and emended description of the genus Hymenobacter Hirsch et al. 1999.

Sandra Buczolits1, Ewald B M Denner1, Peter Kämpfer2, Hans-Jürgen Busse1.   

Abstract

Two airborne bacterial isolates, NS/2 and NS/50(T), were examined in order to determine their taxonomic position. Their almost complete 16S rRNA gene sequences shared 95.9 % similarity. Sequence comparisons demonstrated that their next relatives are species of the genus Hymenobacter (93.6-95.7 % similarity) and the strains 'Taxeobacter chitinovorans' Txc1(T), 'Taxeobacter gelupurpurascens' Txg1(T) and 'Taxeobacter ocellatus' Myx 2105(T) (90.5-96.4 %). Phylogenetic calculations indicated that these five strains together with the three recognized Hymenobacter species form a separate line of descent within the family 'Flexibacteraceae'. Isolates NS/2 and NS/50(T), as well as 'Taxeobacter chitinovorans' Txc1(T), 'Taxeobacter gelupurpurascens' Txg1(T) and 'Taxeobacter ocellatus' Myx 2105(T), possessed the characteristics of the genus Hymenobacter, the quinone system menaquinone MK-7 and a polyamine pattern with the major polyamine being sym-homospermidine. Each of the five strains had complex, unique polar lipid profiles, with phosphatidylethanolamine and several unknown aminophospho-, amino-, phospho-, glyco- and polar lipids of which several compounds were also found in established Hymenobacter species. All the strains studied possessed fatty acids characteristic of Hymenobacter species, including major acids iso-C(15 : 0), anteiso-C(15 : 0), C(16 : 1)omega5c, summed feature 3 (C(16 : 1)omega7c/iso-C(15 : 0) 2-OH) and summed feature 4 (iso-C(17 : 1) I/anteiso-C(17 : 1) B). The five strains could be distinguished from each other and from the three established species of the genus Hymenobacter based on relatively low 16S rRNA gene sequence similarities (<97 %), unique polar lipids and differing fatty acid profiles and physiological characteristics. In conclusion, the description of four novel species of the genus Hymenobacter appears to be justified, for which the names Hymenobacter norwichensis sp. nov. (type strain NS/50(T)=LMG 21876(T)=DSM 15439(T)), Hymenobacter chitinivorans sp. nov. (type strain Txc1(T)=LMG 21951(T)=DSM 11115(T)), Hymenobacter gelipurpurascens sp. nov. (type strain Txg1(T)=LMG 21874(T)=DSM [corrected][11116(T)) and Hymenobacter ocellatus sp. nov. (type strain Myx 2105(T)=Txo1(T)=LMG 21873(T)=DSM 11117(T)) are proposed. For strain NS/2, a description only is provided without proposal of a name because its status as a novel species was not demonstrated unambiguously.

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Year:  2006        PMID: 16957101     DOI: 10.1099/ijs.0.64371-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  20 in total

1.  Characterization of Hymenobacter isolates from Victoria Upper Glacier, Antarctica reveals five new species and substantial non-vertical evolution within this genus.

Authors:  Jonathan L Klassen; Julia M Foght
Journal:  Extremophiles       Date:  2010-11-21       Impact factor: 2.395

2.  Hymenobacter jeollabukensis sp. nov., isolated from soil.

Authors:  Leonid N Ten; Young Eun Han; Kyeung Il Park; In-Kyu Kang; Jeung-Sul Han; Hee-Young Jung
Journal:  J Microbiol       Date:  2018-06-28       Impact factor: 3.422

3.  Hymenobacter pomorum sp. nov., Isolated from Apple Orchard Soil.

Authors:  Leonid N Ten; Weilan Li; Seung-Yeol Lee; In-Kyu Kang; Young-Je Cho; Myung Kyum Kim; Hee-Young Jung
Journal:  Curr Microbiol       Date:  2018-11-16       Impact factor: 2.188

4.  Hymenobacter taeanensis sp. nov., radiation resistant bacterium isolated from coastal sand dune.

Authors:  Ji Hee Lee; Jong-Hyun Jung; Min-Kyu Kim; Han Na Choe; Sangyong Lim
Journal:  Antonie Van Leeuwenhoek       Date:  2021-07-22       Impact factor: 2.271

5.  Biological Ice-Nucleating Particles Deposited Year-Round in Subtropical Precipitation.

Authors:  Rachel E Joyce; Heather Lavender; Jennifer Farrar; Jason T Werth; Carolyn F Weber; Juliana D'Andrilli; Mickaël Vaitilingom; Brent C Christner
Journal:  Appl Environ Microbiol       Date:  2019-11-14       Impact factor: 4.792

6.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

7.  Hymenobacter knuensis sp. nov., Isolated From River Water.

Authors:  Leonid N Ten; Jae-Jin Lee; Yeon-Hee Lee; Su-Jin Park; Seung-Yeol Lee; Sangkyu Park; Dae Sung Lee; In-Kyu Kang; Myung Kyum Kim; Hee-Young Jung
Journal:  Curr Microbiol       Date:  2017-02-27       Impact factor: 2.188

8.  Seasonal Patterns Contribute More Towards Phyllosphere Bacterial Community Structure than Short-Term Perturbations.

Authors:  Bram W G Stone; Colin R Jackson
Journal:  Microb Ecol       Date:  2020-08-01       Impact factor: 4.552

9.  Microbial community structure, pigment composition, and nitrogen source of red snow in Antarctica.

Authors:  Masanori Fujii; Yoshinori Takano; Hisaya Kojima; Tamotsu Hoshino; Ryouichi Tanaka; Manabu Fukui
Journal:  Microb Ecol       Date:  2009-10-22       Impact factor: 4.552

10.  Hymenobacter sedentarius sp. nov., isolated from a soil.

Authors:  Jae-Jin Lee; Myung-Suk Kang; Eun Sun Joo; Hee-Young Jung; Myung Kyum Kim
Journal:  J Microbiol       Date:  2016-04-01       Impact factor: 3.422

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