Literature DB >> 29292687

Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes.

Jongsik Chun1, Aharon Oren2, Antonio Ventosa3, Henrik Christensen4, David Ruiz Arahal5, Milton S da Costa6, Alejandro P Rooney7, Hana Yi8, Xue-Wei Xu9, Sofie De Meyer10, Martha E Trujillo11.   

Abstract

Advancement of DNA sequencing technology allows the routine use of genome sequences in the various fields of microbiology. The information held in genome sequences proved to provide objective and reliable means in the taxonomy of prokaryotes. Here, we describe the minimal standards for the quality of genome sequences and how they can be applied for taxonomic purposes.

Keywords:  average nucleotide identity; genome sequence; minimal standards; phylogenomics; prokaryotic taxonomy

Mesh：

Year:  2018        PMID： 29292687     DOI： 10.1099/ijsem.0.002516

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN： 1466-5026            Impact factor:   2.747


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