| Literature DB >> 35330158 |
Lapo Bonosi1, Gianluca Ferini2, Giuseppe Roberto Giammalva1, Umberto Emanuele Benigno1, Massimiliano Porzio1, Evier Andrea Giovannini1, Sofia Musso1, Rosa Maria Gerardi1, Lara Brunasso1, Roberta Costanzo1, Federica Paolini1, Francesca Graziano3, Gianluca Scalia3, Giuseppe Emmanuele Umana4, Rina Di Bonaventura5, Carmelo Lucio Sturiale5, Domenico Gerardo Iacopino1, Rosario Maugeri1.
Abstract
Gliomas, particularly high-grade gliomas, represent the most common and aggressive tumors of the CNS and are still burdened by high mortality and a very poor prognosis, regardless of the type of therapy. Their diagnosis and monitoring rely on imaging techniques and direct biopsy of the pathological tissue; however, both procedures have inherent limitations. To address these limitations, liquid biopsies have been proposed in this field. They could represent an innovative tool that could help clinicians in the early diagnosis, monitoring, and prognosis of these tumors. Furthermore, the rapid development of next-generation sequencing (NGS) technologies has led to a significant reduction in sequencing cost, with improved accuracy, providing a molecular profile of cancer and leading to better survival results and less disease burden. This paper focuses on the current clinical application of liquid biopsy in the early diagnosis and prognosis of cancer, introduces NGS-related methods, reviews recent progress, and summarizes challenges and future perspectives.Entities:
Keywords: GBM; circulating tumor DNA; extracellular vesicles; high-grade glioma; liquid biopsy; miRNA; next-generation sequencing
Year: 2022 PMID: 35330158 PMCID: PMC8950809 DOI: 10.3390/life12030407
Source DB: PubMed Journal: Life (Basel) ISSN: 2075-1729
Figure 1Scheme of gliomagenesis with the most-studied mutations.
Figure 2Advantages and disadvantages of quantitative polymerase chain reaction (qPCR) versus next-generation sequencing (NGS).
Figure 3PRISMA 2020 Flow diagram.
Overview of all included studies reporting the role of liquid biopsy in clinical setting and sensitivity/specificity of the biomarkers studied.
| Author, Year | Type of Study | Patients ( | Biomarker | Sample | Detection Method | Role | Sensitivity | Specificity |
|---|---|---|---|---|---|---|---|---|
| Olioso D. et al., 2021 [ | Prospective study | 52 GBM | miR-21 | serum | qRT-PCR |
Discrimination between stable and progressed patients Prediction of poorer prognosis Prediction of response to therapy |
miR-21 AUC 0.52, miR-222 AUC 0.51 (T1); miR-21 AUC 0.53, miR-222 AUC 0.58 (T2) miR-124-3p AUC 0.71 miR-21 AUC 0.78 (T3) | |
| Swellam M. et al., 2021 [ | Prospective study | 25 GBM | miR-17-5p | blood | qRT-PCR |
Diagnostic Prognostic Impact of miRs expression on response to treatment | 50.5% | 100% |
| Palande V. et al., 2021 [ | Prospective study | 25 GBM | cfDNA | plasma | NGS |
Diagnostic Monitoring Targeted therapy | 80% | 90% |
| Zhang H. et al., 2019 [ | Prospective study | 95 GBM | miR-100 | blood | qRT-PCR |
Diagnostic | 77.89% | 83.33% |
| Swellam M. et al., 2019 [ | Prospective study | 20 GBM, | miR-221 | Serum | qRT-PCR |
Diagnostic Prognostic | 90% | 90% |
| Manda SV. et al., 2018 [ | Prospective study | 96 high-grade gliomas | EGFRvIII RNA in serum-derived EVs | Serum | PCR |
Diagnostic | 81.58% | 79.31% |
| Figueroa JM. et al., 2017 [ | Prospective study | 71 | wtEGFR and EGFRvIII RNA in CSF-derived EVs. | CSF | PCR |
Diagnostic and monitoring | 61% | 98% |
Abbreviations: HC: healthy controls; GBM: glioblastoma; cfDNA: circulating free DNA; EGFRvIII: epithelial growth factor receptor variant III; CSF: cerebrospinal fluid; qRT-PCR: quantitative real-time—polymerase chain reaction; NGS: next-generation sequencing