Literature DB >> 21531791

Chromosome 7p11.2 (EGFR) variation influences glioma risk.

Marc Sanson1, Fay J Hosking, Sanjay Shete, Diana Zelenika, Sara E Dobbins, Yussanne Ma, Victor Enciso-Mora, Ahmed Idbaih, Jean-Yves Delattre, Khe Hoang-Xuan, Yannick Marie, Blandine Boisselier, Catherine Carpentier, Xiao-Wei Wang, Anna Luisa Di Stefano, Marianne Labussière, Konstantinos Gousias, Johannes Schramm, Anne Boland, Doris Lechner, Ivo Gut, Georgina Armstrong, Yanhong Liu, Robert Yu, Ching Lau, Maria Chiara Di Bernardo, Lindsay B Robertson, Kenneth Muir, Sarah Hepworth, Anthony Swerdlow, Minouk J Schoemaker, H-Erich Wichmann, Martina Müller, Stefan Schreiber, Andre Franke, Susanne Moebus, Lewin Eisele, Asta Försti, Kari Hemminki, Mark Lathrop, Melissa Bondy, Richard S Houlston, Matthias Simon.   

Abstract

While gliomas are the most common primary brain tumors, their etiology is largely unknown. To identify novel risk loci for glioma, we conducted genome-wide association (GWA) analysis of two case-control series from France and Germany (2269 cases and 2500 controls). Pooling these data with previously reported UK and US GWA studies provided data on 4147 glioma cases and 7435 controls genotyped for 424 460 common tagging single-nucleotide polymorphisms. Using these data, we demonstrate two statistically independent associations between glioma and rs11979158 and rs2252586, at 7p11.2 which encompasses the EGFR gene (population-corrected statistics, P(c) = 7.72 × 10(-8) and 2.09 × 10(-8), respectively). Both associations were independent of tumor subtype, and were independent of EGFR amplification, p16INK4a deletion and IDH1 mutation status in tumors; compatible with driver effects of the variants on glioma development. These findings show that variation in 7p11.2 is a determinant of inherited glioma risk.

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Year:  2011        PMID: 21531791      PMCID: PMC3118762          DOI: 10.1093/hmg/ddr192

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  27 in total

1.  A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer.

Authors:  David J Hunter; Peter Kraft; Kevin B Jacobs; David G Cox; Meredith Yeager; Susan E Hankinson; Sholom Wacholder; Zhaoming Wang; Robert Welch; Amy Hutchinson; Junwen Wang; Kai Yu; Nilanjan Chatterjee; Nick Orr; Walter C Willett; Graham A Colditz; Regina G Ziegler; Christine D Berg; Saundra S Buys; Catherine A McCarty; Heather Spencer Feigelson; Eugenia E Calle; Michael J Thun; Richard B Hayes; Margaret Tucker; Daniela S Gerhard; Joseph F Fraumeni; Robert N Hoover; Gilles Thomas; Stephen J Chanock
Journal:  Nat Genet       Date:  2007-05-27       Impact factor: 38.330

Review 2.  Brain tumor epidemiology: consensus from the Brain Tumor Epidemiology Consortium.

Authors:  Melissa L Bondy; Michael E Scheurer; Beatrice Malmer; Jill S Barnholtz-Sloan; Faith G Davis; Dora Il'yasova; Carol Kruchko; Bridget J McCarthy; Preetha Rajaraman; Judith A Schwartzbaum; Siegal Sadetzki; Brigitte Schlehofer; Tarik Tihan; Joseph L Wiemels; Margaret Wrensch; Patricia A Buffler
Journal:  Cancer       Date:  2008-10-01       Impact factor: 6.860

3.  Epidermal growth factor receptor extracellular domain mutations in primary glioblastoma.

Authors:  A Idbaih; J Aimard; B Boisselier; Y Marie; S Paris; E Crinière; R Carvalho Silva; F Laigle-Donadey; A Rousseau; K Mokhtari; J Thillet; M Sanson; K Hoang-Xuan; J-Y Delattre
Journal:  Neuropathol Appl Neurobiol       Date:  2009-04       Impact factor: 8.090

4.  Familial risks in nervous-system tumours: a histology-specific analysis from Sweden and Norway.

Authors:  Kari Hemminki; Steinar Tretli; Jan Sundquist; Tom B Johannesen; Charlotta Granström
Journal:  Lancet Oncol       Date:  2009-04-06       Impact factor: 41.316

5.  BAC array CGH distinguishes mutually exclusive alterations that define clinicogenetic subtypes of gliomas.

Authors:  Ahmed Idbaih; Yannick Marie; Carlo Lucchesi; Gaëlle Pierron; Elodie Manié; Virginie Raynal; Véronique Mosseri; Khê Hoang-Xuan; Michèle Kujas; Isabel Brito; Karima Mokhtari; Marc Sanson; Emmanuel Barillot; Alain Aurias; Jean-Yves Delattre; Olivier Delattre
Journal:  Int J Cancer       Date:  2008-04-15       Impact factor: 7.396

6.  The methylenetetrahydrofolate reductase (MTHFR) variant c.677C>T (A222V) influences overall survival of patients with glioblastoma multiforme.

Authors:  Michael Linnebank; Alexander Semmler; Susanna Moskau; Yvo Smulders; Henk Blom; Matthias Simon
Journal:  Neuro Oncol       Date:  2008-05-22       Impact factor: 12.300

Review 7.  The EGFRvIII variant in glioblastoma multiforme.

Authors:  Hui K Gan; Andrew H Kaye; Rodney B Luwor
Journal:  J Clin Neurosci       Date:  2009-03-25       Impact factor: 1.961

8.  Epidermal growth factor receptor activation in glioblastoma through novel missense mutations in the extracellular domain.

Authors:  Jeffrey C Lee; Igor Vivanco; Rameen Beroukhim; Julie H Y Huang; Whei L Feng; Ralph M DeBiasi; Koji Yoshimoto; Jennifer C King; Phioanh Nghiemphu; Yuki Yuza; Qing Xu; Heidi Greulich; Roman K Thomas; J Guillermo Paez; Timothy C Peck; David J Linhart; Karen A Glatt; Gad Getz; Robert Onofrio; Liuda Ziaugra; Ross L Levine; Stacey Gabriel; Tomohiro Kawaguchi; Keith O'Neill; Haumith Khan; Linda M Liau; Stanley F Nelson; P Nagesh Rao; Paul Mischel; Russell O Pieper; Tim Cloughesy; Daniel J Leahy; William R Sellers; Charles L Sawyers; Matthew Meyerson; Ingo K Mellinghoff
Journal:  PLoS Med       Date:  2006-12       Impact factor: 11.069

9.  Comprehensive genomic characterization defines human glioblastoma genes and core pathways.

Authors: 
Journal:  Nature       Date:  2008-09-04       Impact factor: 49.962

10.  Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility.

Authors:  Margaret Wrensch; Robert B Jenkins; Jeffrey S Chang; Ru-Fang Yeh; Yuanyuan Xiao; Paul A Decker; Karla V Ballman; Mitchel Berger; Jan C Buckner; Susan Chang; Caterina Giannini; Chandralekha Halder; Thomas M Kollmeyer; Matthew L Kosel; Daniel H LaChance; Lucie McCoy; Brian P O'Neill; Joe Patoka; Alexander R Pico; Michael Prados; Charles Quesenberry; Terri Rice; Amanda L Rynearson; Ivan Smirnov; Tarik Tihan; Joe Wiemels; Ping Yang; John K Wiencke
Journal:  Nat Genet       Date:  2009-07-05       Impact factor: 38.330

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  94 in total

1.  Genetic variations in the homologous recombination repair pathway genes modify risk of glioma.

Authors:  Haishi Zhang; Yanhong Liu; Keke Zhou; Chengcheng Zhou; Renke Zhou; Chunxia Cheng; Qingyi Wei; Daru Lu; Liangfu Zhou
Journal:  J Neurooncol       Date:  2015-10-29       Impact factor: 4.130

Review 2.  Genome-Wide Association Studies of Cancer in Diverse Populations.

Authors:  Sungshim L Park; Iona Cheng; Christopher A Haiman
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2017-06-21       Impact factor: 4.254

Review 3.  Genetic and molecular epidemiology of adult diffuse glioma.

Authors:  Annette M Molinaro; Jennie W Taylor; John K Wiencke; Margaret R Wrensch
Journal:  Nat Rev Neurol       Date:  2019-06-21       Impact factor: 42.937

4.  A subset-based approach improves power and interpretation for the combined analysis of genetic association studies of heterogeneous traits.

Authors:  Samsiddhi Bhattacharjee; Preetha Rajaraman; Kevin B Jacobs; William A Wheeler; Beatrice S Melin; Patricia Hartge; Meredith Yeager; Charles C Chung; Stephen J Chanock; Nilanjan Chatterjee
Journal:  Am J Hum Genet       Date:  2012-05-04       Impact factor: 11.025

5.  Cytokine gene polymorphisms and progression-free survival in classical Hodgkin lymphoma by EBV status: results from two independent cohorts.

Authors:  Hervé Ghesquières; Matthew J Maurer; Olivier Casasnovas; Stephen M Ansell; Beth R Larrabee; Eva Lech-Maranda; Anne J Novak; Anne-Laure Borrel; Susan L Slager; Pauline Brice; Cristine Allmer; Annie Brion; Steven C Ziesmer; Franck Morschhauser; Thomas M Habermann; Isabelle Gaillard; Brian K Link; Aspasia Stamatoullas; Christophe Fermé; Ahmet Dogan; William R Macon; Josée Audouin; James R Cerhan; Gilles Salles
Journal:  Cytokine       Date:  2013-09-03       Impact factor: 3.861

6.  Genetic Modulation of Neurocognitive Function in Glioma Patients.

Authors:  Yanhong Liu; Renke Zhou; Erik P Sulman; Michael E Scheurer; Nicholas Boehling; Georgina N Armstrong; Spiridon Tsavachidis; Fu-Wen Liang; Carol J Etzel; Charles A Conrad; Mark R Gilbert; Terri S Armstrong; Melissa L Bondy; Jeffrey S Wefel
Journal:  Clin Cancer Res       Date:  2015-04-22       Impact factor: 12.531

7.  Polymorphisms in IL-4/IL-13 pathway genes and glioma risk: an updated meta-analysis.

Authors:  Peiqin Chen; Chao Chen; Kun Chen; Tao Xu; Chun Luo
Journal:  Tumour Biol       Date:  2014-12-04

8.  Deciphering the 8q24.21 association for glioma.

Authors:  Victor Enciso-Mora; Fay J Hosking; Ben Kinnersley; Yufei Wang; Sanjay Shete; Diana Zelenika; Peter Broderick; Ahmed Idbaih; Jean-Yves Delattre; Khe Hoang-Xuan; Yannick Marie; Anna Luisa Di Stefano; Marianne Labussière; Sara Dobbins; Blandine Boisselier; Pietro Ciccarino; Marta Rossetto; Georgina Armstrong; Yanhong Liu; Konstantinos Gousias; Johannes Schramm; Ching Lau; Sarah J Hepworth; Konstantin Strauch; Martina Müller-Nurasyid; Stefan Schreiber; Andre Franke; Susanne Moebus; Lewin Eisele; Asta Forsti; Kari Hemminki; Ian P Tomlinson; Anthony Swerdlow; Mark Lathrop; Matthias Simon; Melissa Bondy; Marc Sanson; Richard S Houlston
Journal:  Hum Mol Genet       Date:  2013-02-11       Impact factor: 6.150

Review 9.  The epidemiology of glioma in adults: a "state of the science" review.

Authors:  Quinn T Ostrom; Luc Bauchet; Faith G Davis; Isabelle Deltour; James L Fisher; Chelsea Eastman Langer; Melike Pekmezci; Judith A Schwartzbaum; Michelle C Turner; Kyle M Walsh; Margaret R Wrensch; Jill S Barnholtz-Sloan
Journal:  Neuro Oncol       Date:  2014-07       Impact factor: 12.300

Review 10.  Association between DNA repair gene polymorphisms and risk of glioma: a systematic review and meta-analysis.

Authors:  Maral Adel Fahmideh; Judith Schwartzbaum; Paolo Frumento; Maria Feychting
Journal:  Neuro Oncol       Date:  2014-02-04       Impact factor: 12.300

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