| Literature DB >> 35328131 |
Eunhyang Park1, Hyunho Han2, Sung-Eun Choi3, Hyunjin Park1, Ha-Young Woo1, Mi Jang4, Hyo-Sup Shim1, Sohyun Hwang3,5,6, Haeyoun Kang3, Nam-Hoon Cho1.
Abstract
High-grade serous carcinoma (HGSCa) of the ovary is featured by TP53 gene mutation. Missense or nonsense mutation types accompany most cases of HGSCa that correlate well with immunohistochemical (IHC) staining results-an all (missense) or none (nonsense) pattern. However, some IHCs produce subclonal or mosaic patterns from which TP53 mutation types, including the wild type of the gene, cannot be clearly deduced. We analyzed a total of 236 cases of ovarian HGSCa and tumors of other histology by matching the results of p53 IHC staining and targeted next-generation sequencing (TruSight Tumor 170 panel). Ambiguous IHCs that do not belong to the conventional "all or none" groups were reviewed to distinguish the true wild type (WT) from potentially pathogenic subclonal or mosaic patterns. There were about 9% of sequencing-IHC mismatching cases, which were enriched by the p53 c-terminal encoding nuclear localization signal and oligomerization domain, in which the subcellular locations of p53 protein were affected. Indeed, mutations in the oligomerization domain of the p53 protein frequently revealed an unmatched signal or cytosolic staining (L289Ffs*57 (Ins), and R342*). We conclude that both mutation types and IHC patterns of p53 are important sources of information to provide a precise diagnosis of HGSCa.Entities:
Keywords: immunohistochemistry; next generation sequencing; oligomerization domain; p53
Year: 2022 PMID: 35328131 PMCID: PMC8947437 DOI: 10.3390/diagnostics12030579
Source DB: PubMed Journal: Diagnostics (Basel) ISSN: 2075-4418
Sample characteristics.
| N Samples * | MM | NM | Frameshift | In-Frame | SP | WT | Total | ||
|---|---|---|---|---|---|---|---|---|---|
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|
|
|
| ||||||
| HGSCa | 130 | 32 | 27 | 6 (5) | 3 (3) | 4 (0) | 202 | ||
| LGSCa | 1 (1) | 1 (1) | |||||||
| Carcino-sarcoma | 7 (7) | 2 (1) | 9 (8) | ||||||
| Endometrioid carcinoma | 4 (4) | 3 (1) | 1 (1) | 1 (0) | 9 (6) | ||||
| Mucinous carcinoma | 5 (5) | 1 (1) | 2 (1) | 8 (7) | |||||
| Clear cell carcinoma | 3 (3) | 3 (3) | |||||||
| Metastatic carcinoma | 3 (3) | 1 (0) | 4 (3) | ||||||
| Total | 153 | 35 | 33 | 6 (5) | 3 (3) | 1 (1) | 4 (0) | 1 (0) | 236 |
* MM = missense mutation; NM = nonsense mutation; SP = splicing; WT = wild type. † n of mutation at DNA binding domain (DBD).
Figure 1Wild-type p53 protein staining of non-HGSCa ovarian epithelial tumors: (a) Endometrioid adenocarcinoma; (b) clear cell adenocarcinoma; (c) low-grade serous carcinoma; (d) micropapillary serous carcinoma.
Figure 2Typical p53 mutation staining of HGSCa: (a) All tumor nuclei are strongly positive for p53. Aneuploidy cells are relatively stronger (arrowheads) than the remaining tumor cells; (b) no positive stained tumor cell, or “none” pattern.
Figure 3(a) Lollipop plot of TP53 mutation frequencies by their domain site reported in this study and the TCGA ovarian serous cystadenocarcinoma dataset. NLS = nuclear localizing site; OD = oligomerization domain. (b,c) Distribution of p53 IHC staining and NGS mutation concordance rate. Chi-square test.
Figure 4IHC mosaic patterns of p53: (a) Partly intense immunoreactivity in the field of papillary serous carcinoma; (b) zonal heterogeneity observed in an endometrioid carcinoma.
Figure 5Cytoplasmic staining patterns of p53 from tumors of TP53 mutations near NLS: (a) Heavy signals look like missense mutation, but careful observation revealed cytoplasmic staining (L289F fs*57); (b) predominant cytoplasmic staining of p53 (R342*).
Figure 6IHC mosaic patterns of p53 from two tumors of TP53 NLS mutation (P301Qfs*44(del): (a) Well-differentiated serous carcinoma with intermittent partly positive signals. (b) Scattered positive cells with relatively high intensity are bizarre multinucleated cells (red arrow) undergoing aneuploidy.
Figure 7P53 mosaic staining patterns in mixed carcinoma: (a) Composite carcinoma including serous carcinoma; (b) endometrioid carcinoma with serous carcinoma, p53 poorly stained. Red asterisks: simple tubular structures often seen in endometrioid carcinoma; (c) mixed clear cell type with a WT pattern of p53, surrounding serous carcinoma showing diffuse staining.
Cases of IHC and TP53 mutation type mismatching (order by AA sequence).
| Type | AA Change | Domain | Mutation | IHC | Tumor | VAF |
|---|---|---|---|---|---|---|
| endometrioid | V73W fs*50 | TD | FSD | WT | 30 | 10.3 |
| clear cell | G105R | DBD | MM | WT | 80 | 49.88 |
| HGSCa | S183* | DBD | NM | “All” | 70 | 42.67 |
| HGSCa | F212_H214del | DBD | IFD | “All” | 70 | 13.62 |
| endometrioid | S261_G262dup | DBD | IFI | WT | 40 | 16.71 |
| HGSCa | G262del | DBD | IFD | “All” | 80 | 32.92 |
| HGSCa | R273H | DBD | MM | “None” | 90 | 0.75 |
| HGSCa | L289F fs*57 | DBD | FSI | Cyto | 70 | 23.66 |
| HGSCa | P301Q fs*44 | NLS | FSD | WT | 60 | 27.28 |
| HGSCa | P301Q fs*44 | NLS | FSD | “All” | 90 | 82.71 |
| HGSCa | R306* | NLS | NM | Cyto | 80 | 0.86 |
| HGSCa | R306* | NLS | NM | WT + Cyto | 80 | 0.60 |
| HGSCa | R342E fs*3 | OD | FSI | “All” | 30 | 36.69 |
| HGSCa | R342* | OD | NM | “All” + Cyto | 90 | 37.4 |
| HGSCa | R342* | OD | NM | “All” | 50 | 7.08 |
| HGSCa | R342* | OD | NM | “All” | 60 | 44.4 |
| HGSCa | E343* | OD | NM | WT | 90 | 0.31 |
| HGSCa | E346* | OD | NM | “All” | 90 | 0.35 |