Literature DB >> 35183822

Assembly of RNA polymerase II transcription initiation complexes.

Lucas Farnung1, Seychelle M Vos2.   

Abstract

The first step of eukaryotic gene expression is the assembly of RNA polymerase II and general transcription factors on promoter DNA. This highly regulated process involves ∼80 different proteins that together form the preinitiation complex (PIC). Decades of work have gone into understanding PIC assembly using biochemical and structural approaches. These efforts have yielded significant but partial descriptions of PIC assembly. Over the past few years, cryo-electron microscopy has provided the first high-resolution structures of the near-complete mammalian PIC assembly. These structures have revealed that PIC assembly is a highly dynamic process. This review will summarize recent structural findings and discuss their implications for understanding cell type-specific gene expression.
Copyright © 2022 Elsevier Ltd. All rights reserved.

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Year:  2022        PMID: 35183822      PMCID: PMC9339144          DOI: 10.1016/j.sbi.2022.102335

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   7.786


  52 in total

Review 1.  Structural basis of transcription initiation by RNA polymerase II.

Authors:  Sarah Sainsbury; Carrie Bernecky; Patrick Cramer
Journal:  Nat Rev Mol Cell Biol       Date:  2015-02-18       Impact factor: 94.444

2.  Mediator structure and conformation change.

Authors:  Heqiao Zhang; Dong-Hua Chen; Rayees U H Mattoo; David A Bushnell; Yannan Wang; Chao Yuan; Lin Wang; Chunnian Wang; Ralph E Davis; Yan Nie; Roger D Kornberg
Journal:  Mol Cell       Date:  2021-02-10       Impact factor: 17.970

3.  Promoter Distortion and Opening in the RNA Polymerase II Cleft.

Authors:  Christian Dienemann; Björn Schwalb; Sandra Schilbach; Patrick Cramer
Journal:  Mol Cell       Date:  2018-11-21       Impact factor: 17.970

4.  Structures of mammalian RNA polymerase II pre-initiation complexes.

Authors:  Shintaro Aibara; Sandra Schilbach; Patrick Cramer
Journal:  Nature       Date:  2021-04-26       Impact factor: 49.962

5.  Subunit architecture and functional modular rearrangements of the transcriptional mediator complex.

Authors:  Kuang-Lei Tsai; Chieri Tomomori-Sato; Shigeo Sato; Ronald C Conaway; Joan W Conaway; Francisco J Asturias
Journal:  Cell       Date:  2014-05-29       Impact factor: 41.582

6.  Genome-wide structure and organization of eukaryotic pre-initiation complexes.

Authors:  Ho Sung Rhee; B Franklin Pugh
Journal:  Nature       Date:  2012-01-18       Impact factor: 49.962

7.  Structures of transcription pre-initiation complex with TFIIH and Mediator.

Authors:  S Schilbach; M Hantsche; D Tegunov; C Dienemann; C Wigge; H Urlaub; P Cramer
Journal:  Nature       Date:  2017-11-01       Impact factor: 49.962

8.  Structure of mammalian Mediator complex reveals Tail module architecture and interaction with a conserved core.

Authors:  Haiyan Zhao; Natalie Young; Jens Kalchschmidt; Jenna Lieberman; Laila El Khattabi; Rafael Casellas; Francisco J Asturias
Journal:  Nat Commun       Date:  2021-03-01       Impact factor: 14.919

9.  In TFIIH the Arch domain of XPD is mechanistically essential for transcription and DNA repair.

Authors:  Stefan Peissert; Florian Sauer; Daniel B Grabarczyk; Cathy Braun; Gudrun Sander; Arnaud Poterszman; Jean-Marc Egly; Jochen Kuper; Caroline Kisker
Journal:  Nat Commun       Date:  2020-04-03       Impact factor: 14.919

10.  The cryo-electron microscopy structure of human transcription factor IIH.

Authors:  Basil J Greber; Thi Hoang Duong Nguyen; Jie Fang; Pavel V Afonine; Paul D Adams; Eva Nogales
Journal:  Nature       Date:  2017-09-13       Impact factor: 49.962

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  2 in total

Review 1.  Structural advances in transcription elongation.

Authors:  Abdallah A Mohamed; Roberto Vazquez Nunez; Seychelle M Vos
Journal:  Curr Opin Struct Biol       Date:  2022-07-09       Impact factor: 7.786

Review 2.  Function and dynamics of the Mediator complex: novel insights and new frontiers.

Authors:  Randall H Morse
Journal:  Transcription       Date:  2022-06-16
  2 in total

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