| Literature DB >> 35163634 |
Eduardo Lopez-Huertas1, Juan M Alcaide-Hidalgo2.
Abstract
The low molecular weight peptide composition of virgin olive oil (VOO) is mostly unknown. We aimed to investigate the composition of the endogenous peptides present in VOO, the protein sources from which those peptides originate and their biological activities. A water-soluble extract containing peptides was obtained from VOO. The peptides were separated by size-exclusion using fast protein liquid chromatography, and the low molecular weight fraction (1600-700 kDa) was analysed by nanoscale liquid chromatography Orbitrap coupled with tandem mass spectrometry and de novo sequencing. Nineteen new peptides were identified by Peaks database algorithm, using the available Olea europaea (cv. Farga) genome database. Eight new peptides were also identified by Peaks de novo sequencing. The protein sources of the peptides detected in the database by Peaks DB were identified by BLAST-P search. Seed storage proteins were among the most frequent sources of VOO peptides. BIOPEP software was used to predict the biological activities of peptides and to simulate (in silico) the proteolytic activity of digestive enzymes on the detected peptide sequences. A selection of synthetic peptides was obtained for investigation of their bioactivities. Peptides VCGEAFGKA, NALLCSNS, CPANGFY, CCYSVY and DCHYFL possessed strong ACE-inhibitory and antioxidant activities in vitro. Antioxidant peptides could play a role in VOO quality.Entities:
Keywords: angiotensin-converting enzyme; antioxidant; bioactive peptides; food peptides; peptidomics; virgin olive oil
Mesh:
Substances:
Year: 2022 PMID: 35163634 PMCID: PMC8836281 DOI: 10.3390/ijms23031712
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Endogenous peptides identified in virgin olive oil using Peaks database (DB) algorithm: −10 lgP score, statistical significance of the peptide-precursor spectrum match; N, number of amino acids; m/z, precursor mass-to-charge ratio; mass, peptide mass in Da; RT, retention time; ppm, precursor mass error; area, peptide abundance shown as area under curve of detected peptide; protein source, best-matched protein identified by BLAST-P search; accession, the accession number of the highest-scoring protein containing this peptide. Oxidised methionine is indicated by M (+15.99). ND, not detected.
| No. | Sequence | −10 lgP | N | m/z | Mass | RT | ppm | Area | Protein Source (BLASTP) | Accession |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | LDTANEMNQLDLQFR | 93.56 | 15 | 904.4365 | 1806.8571 | 34.18 | 8.3 | 1.0 × 106 | 11S globulin subunit beta-like | OE9A085162P3: |
| 2 | VVLQDTSNNVNQLD | 77.73 | 14 | 779.8878 | 1557.7634 | 24.96 | 5.9 | 3.44 × 105 | legumin A-like | OE9A032471P1: |
| 3 | VVLQDTSNNVNQLDDIPRRFFLA | 63.26 | 23 | 892.1344 | 2673.3875 | 48.98 | 5.2 | ND | legumin A-like | OE9A032471P1: |
| 4 | AVVPIWLQPDTPAR | 57.79 | 14 | 781.9397 | 1561.8616 | 38.09 | 9.6 | 4.39 × 105 | apyrase-like | OE9A001718P2: |
| 5 | IFSGGESSGQPR | 57.53 | 12 | 611.2961 | 1220.5785 | 22.47 | 6.8 | 1.24 × 105 | legumin A-like | OE9A032471P1: |
| 6 | DTSNNVNQLDDIPRR | 46.89 | 15 | 586.2892 | 1755.8500 | 26.25 | 5.1 | 1.54 × 105 | legumin A-like | OE9A032471P1: |
| 7 | NCSTSIISG | 39.01 | 9 | 441.2062 | 880.3961 | 35.88 | 9.5 | 3.49 × 107 | hypothetical predicted protein | OE9A087501P1 |
| 8 | VHVFRFDQNQDLLPIGN | 34.71 | 17 | 671.3506 | 2011.0275 | 48.03 | 8.8 | 1.53 × 104 | apyrase-like | OE9A001718P2: |
| 9 | LLLGAGCM(+15.99) | 34.51 | 8 | 397.1985 | 792.3874 | 33.76 | 1.4 | 1.24 × 107 | zinc transporter 5-like | OE9A117792P1 |
| 10 | QDTSNNVNQLDDIPRR | 33.36 | 16 | 628.9771 | 1883.9086 | 26.36 | 8.0 | 2.06 × 106 | legumin A-like | OE9A032471P1: |
| 11 | FSASTEGS | 32.74 | 8 | 393.1665 | 784.3239 | 25.27 | 0.5 | 9.63 × 105 | probable L-type lectin domain containing receptor kinase S.7 | OE9A013295P1: |
| 12 | INTISGR | 31.90 | 7 | 380.7197 | 759.4239 | 20.53 | 8.6 | 1.38 × 105 | legumin A-like | OE9A032471P1: |
| 13 | LDGNSSAR | 31.66 | 8 | 410.1964 | 818.3882 | 18.63 | −4.9 | 1.41 × 105 | late blight resistance protein homolog R1A-10 | OE9A106456P1 |
| 14 | VCGEAFGKA | 31.36 | 9 | 441.2060 | 880.4113 | 33.38 | −8.2 | 4.18 × 106 | translation initiation factor IF-2, chloroplastic | OE9A058866P1 |
| 15 | KGGGGGSGSAGGGGS | 31.14 | 15 | 525.2275 | 1048.4534 | 35.95 | −4.9 | 4.01 × 106 | mitogen-activated kinase 9-like, partial | OE9A057915P1 |
| 16 | SGPGNHEQ | 30.94 | 8 | 413.1722 | 824.3413 | 30.38 | −6.5 | ND | hypothetical predicted protein | OE9A054657P1: |
| 17 | LGGGGSSGGAAC | 30.30 | 12 | 447.1878 | 892.3708 | 20.67 | −3.4 | 4.31 × 105 | VASP homolog (vasodilator-stimulated phosphoprotein) | OE9A026632P1 |
| 18 | NALLCSNS | 30.09 | 8 | 411.1950 | 820.3749 | 27.63 | 8.1 | 2.25 × 105 | transcription factor bHLH143-like | OE9A100476P1 |
| 19 | CPANGFY | 29.54 | 7 | 386.1598 | 770.3057 | 26.19 | 6.7 | ND | basic endochitinase-like | OE9A087887P1 |
Proteins identified as sources of endogenous peptides detected in virgin olive oil: protein −10 lgP score, sum of −10 lgP scores of a protein’s supporting peptides; peptides, number of high-confidence supporting peptides; cover (%), percentage of the protein sequence covered by supporting peptides; area, protein relative abundance; protein identification, definitions of best-matched proteins identified by BLAST-P search; E-value (score), number of expected hits of similar quality that could be found randomly; protein description, access to protein report.
| Protein | −10 lgP | Peptides | Cover (%) | Average Mass (Da) | Area | Protein Identification | E-Value | % Identity | Protein |
|---|---|---|---|---|---|---|---|---|---|
|
| 155.75 | 6 | 9 | 51,572 | 2.82 × 106 | legumin A-like | 0.0 | 100 |
|
|
| 155.75 | 6 | 9 | 51,725 | 2.82 × 106 | legumin A-like | 0.0 | 100 |
|
|
| 93.56 | 1 | 4 | 40,777 | 1.08 × 106 | 11S globulin subunit beta-like | 0.0 | 100 |
|
|
| 93.56 | 1 | 4 | 44,093 | 1.08 × 106 | 11S globulin subunit beta-like | 0.0 | 100 |
|
|
| 93.56 | 1 | 3 | 55,757 | 1.08 × 106 | 11S globulin subunit beta-like | 0.0 | 100 |
|
|
| 75.15 | 2 | 7 | 47,253 | 4.54 × 105 | apyrase-like | 0.0 | 100 |
|
|
| 75.15 | 2 | 7 | 49,955 | 4.54 × 105 | apyrase-like | 0.0 | 100 |
|
|
| 43.19 | 1 | 7 | 21,805 | 4.01 × 106 | mitogen-activated kinase 9-like | 6 × 10−86 | 100 |
|
|
| 43.16 | 1 | 2 | 38,475 | 6.11 × 106 | zinc transporter 5-like | 0.0 | 100 |
|
|
| 39.01 | 1 | 4 | 27,647 | 3.49 × 107 | hypothetical predicted protein | 1 × 10−160 | 100 | CAA2984267.1 |
|
| 32.74 | 1 | 1 | 72,709 | 9.63 × 105 | probable L-type lectin domain containing receptor kinase S.7 | 0.0 | 100 |
|
|
| 32.74 | 1 | 1 | 75,341 | 9.63 × 105 | probable L-type lectin domain containing receptor kinase S.7 | 0.0 | 100 |
|
|
| 32.74 | 1 | 1 | 75,780 | 9.63 × 105 | probable L-type lectin domain containing receptor kinase S.7 | 0.0 | 100 |
|
|
| 31.66 | 1 | 1 | 86,941 | 7.40 × 104 | late blight resistance protein homolog R1A-10 | 0.0 | 100 |
|
|
| 31.36 | 1 | 1 | 108,486 | 4.18 × 106 | translation initiation factor IF-2, chloroplastic | 0.0 | 100 |
|
|
| 30.94 | 1 | 3 | 30,439 | 0 | hypothetical predicted protein | 4 × 10−138 | 100 |
|
|
| 30.94 | 1 | 2 | 41,131 | 0 | hypothetical predicted protein | 2 × 10−172 | 100 |
|
|
| 30.3 | 1 | 4 | 30,682 | 4.31 × 105 | VASP homolog | 2 × 10−136 | 100 |
|
|
| 30.09 | 1 | 2 | 38,275 | 2.25 × 105 | hypothetical predicted protein (transcription factor bHLH143-like) | 0.0 | 100 |
|
|
| 29.54 | 1 | 3 | 28,540 | 0 | basic endochitinase-like | 0.0 | 100 |
|
Endogenous peptides identified in virgin olive oil by de novo sequencing: ALC, average local confidence; N, number of amino acids; m/z, precursor mass-to-charge ratio; mass, peptide mass in Da; RT, retention time; area, peptide abundance shown as area under the curve of the detected peptide; ppm, precursor mass error; local confidence, local confidence score for each amino acid of the peptide identified by de novo sequencing. Oxidised methionine is indicated by a pair of parentheses enclosing the modification mass (+15.99). ND, not detected.
| No. | Peptide | ALC (%) | N | m/z | Mass | RT | Area | ppm | Local Confidence (%) |
|---|---|---|---|---|---|---|---|---|---|
| 1 de novo | CCYSVY | 95 | 6 | 369.1365 | 736.256 | 24.36 | 5.77 × 105 | 3.2 | 92 97 99 93 92 98 |
| 2 de novo | DCHYFL | 94 | 6 | 399.1715 | 796.3214 | 25.13 | 6.41 × 104 | 8.9 | 92 98 98 98 90 93 |
| 3 de novo | LYPFAH | 94 | 6 | 374.1952 | 746.3751 | 19.07 | 3.59 × 105 | 1 | 99 99 99 85 89 93 |
| 4 de novo | SVSKPGW | 92 | 7 | 380.7006 | 759.3915 | 14.03 | 1.85 × 105 | −6.5 | 93 97 99 99 89 78 93 |
| 5 de novo | LHTVVH | 91 | 6 | 353.2084 | 704.397 | 26.06 | 8.67 × 104 | 7.6 | 99 93 93 92 85 87 |
| 6 de novo | NKLCCEH | 91 | 7 | 423.6815 | 845.3524 | 29.15 | ND | −4.7 | 84 95 98 94 86 94 89 |
| 7 de novo | DHHEEL | 91 | 6 | 390.1661 | 778.3246 | 36.35 | 7.71 × 104 | −8.9 | 89 91 97 91 92 85 |
| 8 de novo | LPCAAHR | 90 | 7 | 384.2062 | 766.3908 | 19.09 | 2.70 × 105 | 9.2 | 98 79 79 89 97 96 95 |
Predicted activity of VOO endogenous peptides identified by Peaks DB using BIOPEP-UWM database of bioactive peptides: ACE, angiotensin-converting enzyme; DPP III, dipeptidyl peptidase-III; DPP IV, dipeptidyl peptidase-IV; A, ratio of number of sequences with predicted activity to number of amino acids; B, potential biological activity of the peptide (µM−1) theoretically calculated from previous bioactive referenced data. A and B values obtained from BIOPEP-UWM database.
| No. | Peptide Sequence | Predicted Activity | No. of Sequences with Activity | A | B |
|---|---|---|---|---|---|
| 1 | LDTANEMNQLDLQFR | ACE inhibitor | 3 | 0.2000 | 7.24 × 10−5 |
| DPP IV inhibitor | 7 | 0.4667 | |||
| DPP III inhibitor | 1 | 0.0667 | |||
| Renin inhibitor | 1 | 0.0667 | |||
| 2 | VVLQDTSNNVNQLD | ACE inhibitor | 2 | 0.1429 | |
| Glucose uptake stimulation | 1 | 0.0714 | |||
| DPP IV inhibitor | 9 | 0.6429 | 9.65 × 10−4 | ||
| 3 | VVLQDTSNNVNQLDDIPRRFFLA | ACE inhibitor | 9 | 0.3913 | 1.36 × 10−2 |
| Activator of ubiquitin-mediated proteolysis | 1 | 0.0435 | |||
| DPP IV inhibitor | 10 | 0.2174 | |||
| DPP III inhibitor | 5 | 0.6087 | 8.62 × 10−4 | ||
| Stimulation | 1 | 0.0435 | |||
| 4 | AVVPIWLQPDTPAR | ACE inhibitor | 10 | 0.7143 | 5.69 × 10−2 |
| DPP IV inhibitor | 10 | 0.7143 | 1.80 × 10−3 | ||
| 5 | IFSGGESSGQPR | ACE inhibitor | 9 | 0.7500 | 4.63 × 10−2 |
| Antioxidant | 1 | 0.0833 | |||
| DPP III inhibitor | 2 | 0.1667 | |||
| DPP IV inhibitor | 4 | 0.3333 | |||
| Neuropeptide | 1 | 0.0833 | |||
| 6 | DTSNNVNQLDDIPRR | ACE inhibitor | 3 | 0.2000 | 1.70 × 10−2 |
| DPP IV inhibitor | 8 | 0.1333 | |||
| DPP III inhibitor | 2 | 0.5333 | 1.62 × 10−4 | ||
| 7 | NCSTSIISG | ACE inhibitor | 2 | 0.2222 | 2.75 × 10−2 |
| DPP IV inhibitor | 3 | 0.3333 | |||
| Glucose uptake stimulation | 1 | 0.1111 | |||
| 8 | VHVFRFDQNQDLLPIGN | ACE inhibitor | 5 | 0.2941 | 8.20 × 10−3 |
| Glucose uptake stimulation | 1 | 0.0588 | |||
| DPP IV inhibitor | 11 | 0.6471 | 2.48 × 10−5 | ||
| DPP III inhibitor | 2 | 0.1176 | |||
| 9 | LLLGAGCM(+15.99) | ACE inhibitor | 3 | 0.3750 | 1.26 × 10−4 |
| Glucose uptake stimulation | 2 | ||||
| Stimulation of vasoactive substance release | 1 | 0.3750 | |||
| DPP IV inhibitor | 3 | 0.5000 | |||
| 10 | QDTSNNVNQLDDIPRR | ACE inhibitor | 3 | 0.1875 | 1.59 × 10−2 |
| DPP IV inhibitor | 9 | 0.5625 | 1.52 × 10−4 | ||
| DPP III inhibitor | 2 | 0.1250 | |||
| 11 | FSASTEGS | ACE inhibitor | 4 | 0.5000 | 3.11 × 10−2 |
| DPP IV inhibitor | 3 | 0.3750 | |||
| 12 | INTISGR | ACE inhibitor | 2 | 0.2857 | 6.14 × 10−5 |
| DPP IV inhibitor | 3 | 0.4286 | |||
| 13 | LDGNSSAR | ACE inhibitor | 2 | 0.2500 | 1.14 × 10−2 |
| 14 | VCGEAFGKA | ACE inhibitor | 7 | 0.7778 | 4.80 × 10−3 |
| Alpha-glucosidase inhibitor | 1 | 0.1111 | 6.53 × 10−6 | ||
| DPP IV inhibitor | 3 | 0.3333 | 1.78 × 10−5 | ||
| DPP III inhibitor | 2 | 0.2222 | |||
| 15 | KGGGGGSGSAGGGGS | ACE inhibitor | 13 | 0.8667 | 1.72 × 10−4 |
| DPP IV inhibitor | 9 | 0.6000 | |||
| 16 | SGPGNHEQ | ACE inhibitor | 4 | 0.5000 | 2.10 × 10−3 |
| Antiamnestic | 2 | 0.2500 | |||
| Antithrombotic | 2 | 0.2500 | |||
| Regulation of stomach mucosal activity | 2 | 0.2500 | |||
| DPP IV inhibitor | 4 | 0.5000 | 1.80 × 10−3 | ||
| 17 | LGGGGSSGGAAC | ACE inhibitor | 9 | 0.7500 | 2.63 × 10−4 |
| Antioxidant | 1 | 0.0833 | |||
| DPP IV inhibitor | 6 | 0.5000 | 8.87 × 10−6 | ||
| 18 | NALLCSNS | Glucose uptake stimulation | 1 | 0.1250 | |
| DPP IV inhibitor | 3 | 0.3750 | 1.42 × 10−6 | ||
| 19 | CPANGFY | ACE inhibitor | 3 | 0.4286 | 5.90 × 10−3 |
| DPP IV inhibitor | 3 | 0.4286 | |||
| DPP III inhibitor | 1 | 0.1429 |
Predicted activity of endogenous peptides identified in virgin olive oil by de novo sequencing using BIOPEP-UWM database of bioactive peptides: ACE, angiotensin converting enzyme; DPP III, dipeptidyl peptidase-III; DPP IV, dipeptidyl peptidase-IV; A, ratio of number of sequences with predicted activity to number of amino acids; B, potential biological activity of the peptide (µM−1) theoretically calculated from previous bioactive referenced data. A and B values obtained from BIOPEP-UWM database.
| No. | Peptide | ALC (%) | Predicted Activity | No. Seq. with Activity | A | B |
|---|---|---|---|---|---|---|
| 1 de novo | CCYSVY | 95 | ACE inhibitor | 2 | 0.3333 | 4.39 × 10−2 |
| Antioxidant | 1 | 0.1667 | ||||
| DPP III inhibitor | 3 | 0.1667 | ||||
| DPP IV inhibitor | 1 | 0.5000 | ||||
| 2 de novo | DCHYFL | 94 | ACE inhibitor | 1 | 0.1667 | 6.38 × 10−3 |
| Anti-inflammatory | 1 | 0.1667 | ||||
| DPP III inhibitor | 3 | 0.3333 | ||||
| DPP IV inhibitor | 2 | 0.5000 | 4.17 × 10−4 | |||
| 3 de novo | LYPFAH | 94 | ACE inhibitor | 4 | 0.6667 | 3.47 × 10−4 |
| Alpha-glucosidase inhibitor | 1 | 0.1667 | 9.92 × 10−5 | |||
| Antioxidant | 2 | 0.3333 | ||||
| DPP III inhibitor | 2 | 0.3333 | ||||
| DPP IV inhibitor | 4 | 0.6667 | 5.25 × 10−5 | |||
| Opioid | 1 | 0.1667 | ||||
| Renin inhibitor | 1 | 0.1667 | ||||
| 4 de novo | SVSKPGW | 92 | ACE inhibitor | 3 | 0.4286 | 1.12 × 10−2 |
| Antiamnestic | 1 | 0.1429 | ||||
| Antioxidant | 1 | 0.1429 | ||||
| Antithrombotic | 1 | 0.1429 | ||||
| Regulation of stomach activity | 1 | 0.1429 | ||||
| DPP IV inhibitor | 6 | 0.8571 | 5.62 × 10−5 | |||
| 5 de novo | LHTVVH | 91 | Antioxidant | 2 | 0.3333 | |
| DPP IV inhibitor | 5 | 0.8333 | ||||
| 6 de novo | NKLCCEH | 91 | ACE inhibitor | 3 | 0.4286 | 4.64 × 10−3 |
| DPP IV inhibitor | 1 | 0.1429 | ||||
| 7 de novo | DHHEEL | 91 | Antioxidative | 3 | 0.5000 | |
| Stimulation of vasoactive substance release | 1 | 0.1667 | ||||
| DPP IV inhibitor | 2 | 0.3333 | ||||
| 8 de novo | LPCAAHR | 90 | ACE inhibitor | 2 | 0.2857 | 2.30 × 10−4 |
| Antioxidant | 1 | 0.1429 | ||||
| DPP IV inhibitor | 4 | 0.5714 | 7.54 × 10−5 |
Molecular species (predicted) produced by the proteolytic activity of main digestive enzymes acting on peptides identified by Peaks DB and by PEAKS de novo sequencing: ACE, angiotensin converting enzyme; DPP, dipeptidyl peptidase. Peptide fragments with previously reported bioactivity are shown in red.
| No. | Peptide Sequence | Pepsin | Trypsin | Chymotrypsin |
|---|---|---|---|---|
| 1 | LDTANEMNQLDLQFR | L-DTANEMNQL-DL- | L-DTAN-EM-N- | |
| 2 | VVLQDTSNNVNQLD | |||
| 3 | VVLQDTSNNVNQLDDIPRRFFLA | |||
| 4 | AVVPIWLQPDTPAR | |||
| 5 | IFSGGESSGQPR | |||
| 6 | DTSNNVNQLDDIPRR | DTSN-N- | ||
| 7 | NCSTSIISG | |||
| 8 | VHVFRFDQNQDLLPIGN | VHVF- | VHVF- | |
| 9 | LLLGAGCM(+15.99) | |||
| 10 | QDTSNNVNQLDDIPRR | QDTSN-N- | ||
| 11 | FSASTEGS | F-SASTEGS | ||
| 12 | INTISGR | |||
| 13 | LDGNSSAR | |||
| 14 | VCGEAFGKA | |||
| 15 | KGGGGGSGSAGGGGS | |||
| 16 | SGPGNHEQ | |||
| 17 | LGGGGSSGGAAC | |||
| 18 | NALLCSNS | N- | ||
| 19 | CPANGFY | CPAN- | ||
| 1 de novo | CCYSVY | CCY- | ||
| 2 de novo | DCHYFL | |||
| 3 de novo | LYPFAH | L- | ||
| 4 de novo | SVSKPGW | |||
| 5 de novo | LHTVVH | |||
| 6 de novo | NKLCCEH | |||
| 7 de novo | DHHEEL | |||
| 8 de novo | LPCAAHR |
ACE-inhibitory activity and ABTS radical antioxidant capacity of a selection of synthetic peptides detected in virgin olive oil. Peptide nos. 1, 2, 5, 10, 14, 18 and 19 were identified by Peaks DB algorithm; peptide nos.1 de novo and 2 de novo were identified by Peaks de novo sequencing algorithm: ACEi activity, angiotensin-converting enzyme inhibitory activity; IC50 (µM), peptide concentration necessary to inhibit 50% of ACE activity, expressed in µM. Antioxidant activity is referred to Trolox and expressed as TEAC (Trolox Equivalent Antioxidant Capacity). Data are means ± SD of three different experiments. ND, not detected.
| No. | Peptide Sequence | ACEi Activity | TEAC ± SD |
|---|---|---|---|
| 1 | LDTANEMNQLDLQFR | ND | ND |
| 2 | VVLQDTSNNVNQLD | ND | ND |
| 5 | IFSGGESSGQPR | ND | ND |
| 10 | QDTSNNVNQLDDIPRR | ND | ND |
| 14 | VCGEAFGKA | 57.2 ± 4.31 | 0.79 ± 0.02 |
| 18 | NALLCSNS | 0.98 ± 0.04 | 0.95 ± 0.03 |
| 19 | CPANGFY | 3.76 ± 0.39 | 1.53± 0.14 |
| 1 de novo | CCYSVY | 25.6 ± 0.41 | 3.20 ± 0.19 |
| 2 de novo | DCHYFL | 41.5 ± 2.09 | 2.36 ± 0.02 |