Literature DB >> 3495309

A nonlinear measure of subalignment similarity and its significance levels.

S F Altschul, B W Erickson.   

Abstract

Mesh：

Substances：

Year:  1986        PMID： 3495309     DOI： 10.1007/BF02462327

Source DB:  PubMed          Journal:  Bull Math Biol        ISSN： 0092-8240            Impact factor:   1.758


× No keyword cloud information.
  21 in total

1.  Complete nucleotide sequences of three VH genes in Caiman, a phylogenetically ancient reptile: evolutionary diversification in coding segments and variation in the structure and organization of recombination elements.

Authors:  G W Litman; K Murphy; L Berger; R Litman; K Hinds; B W Erickson
Journal:  Proc Natl Acad Sci U S A       Date:  1985-02       Impact factor: 11.205

2.  Comparative statistics for DNA and protein sequences: single sequence analysis.

Authors:  S Karlin; G Ghandour
Journal:  Proc Natl Acad Sci U S A       Date:  1985-09       Impact factor: 11.205

3.  Locally optimal subalignments using nonlinear similarity functions.

Authors:  S F Altschul; B W Erickson
Journal:  Bull Math Biol       Date:  1986       Impact factor: 1.758

4.  Calculating the expected frequencies of potential secondary structure in nucleic acids as a function of stem length, loop size, base composition and nearest-neighbor frequencies.

Authors:  W M Fitch
Journal:  Nucleic Acids Res       Date:  1983-07-11       Impact factor: 16.971

5.  An improved algorithm for matching biological sequences.

Authors:  O Gotoh
Journal:  J Mol Biol       Date:  1982-12-15       Impact factor: 5.469

6.  Complete nucleotide sequence of the neuraminidase gene of influenza B virus.

Authors:  M W Shaw; R A Lamb; B W Erickson; D J Briedis; P W Choppin
Journal:  Proc Natl Acad Sci U S A       Date:  1982-11       Impact factor: 11.205

7.  Significance of nucleotide sequence alignments: a method for random sequence permutation that preserves dinucleotide and codon usage.

Authors:  S F Altschul; B W Erickson
Journal:  Mol Biol Evol       Date:  1985-11       Impact factor: 16.240

8.  Efficient sequence alignment algorithms.

Authors:  M S Waterman
Journal:  J Theor Biol       Date:  1984-06-07       Impact factor: 2.691

9.  Internal duplication in human alpha 1 and beta 1 interferons.

Authors:  B W Erickson; L T May; P B Sehgal
Journal:  Proc Natl Acad Sci U S A       Date:  1984-11       Impact factor: 11.205

10.  Structure and expression of a cloned cDNA for human interleukin-2.

Authors:  T Taniguchi; H Matsui; T Fujita; C Takaoka; N Kashima; R Yoshimoto; J Hamuro
Journal:  Nature       Date:  1983 Mar 24-30       Impact factor: 49.962
View more
  13 in total

1.  A novel approach to structural alignment using realistic structural and environmental information.

Authors:  Yu Chen; Gordon M Crippen
Journal:  Protein Sci       Date:  2005-10-31       Impact factor: 6.725

2.  Two new members of the OmpR superfamily detected by homology to a sensor-binding core domain.

Authors:  T L Timme; C B Lawrence; R E Moses
Journal:  J Mol Evol       Date:  1989-06       Impact factor: 2.395

3.  Locally optimal subalignments using nonlinear similarity functions.

Authors:  S F Altschul; B W Erickson
Journal:  Bull Math Biol       Date:  1986       Impact factor: 1.758

4.  Optimal sequence alignment using affine gap costs.

Authors:  S F Altschul; B W Erickson
Journal:  Bull Math Biol       Date:  1986       Impact factor: 1.758

5.  Optimized homology searches of the gene and protein sequence data banks.

Authors:  C B Lawrence; D A Goldman; R T Hood
Journal:  Bull Math Biol       Date:  1986       Impact factor: 1.758

6.  Significance levels for biological sequence comparison using non-linear similarity functions.

Authors:  S F Altschul; B W Erickson
Journal:  Bull Math Biol       Date:  1988       Impact factor: 1.758

7.  A protein alignment scoring system sensitive at all evolutionary distances.

Authors:  S F Altschul
Journal:  J Mol Evol       Date:  1993-03       Impact factor: 2.395

8.  Alignment of Escherichia coli K12 DNA sequences to a genomic restriction map.

Authors:  K E Rudd; W Miller; J Ostell; D A Benson
Journal:  Nucleic Acids Res       Date:  1990-01-25       Impact factor: 16.971

9.  Identification of a cytochrome P450 gene by reverse transcription--PCR using degenerate primers containing inosine.

Authors:  Z Shen; R L Wells; J Liu; M M Elkind
Journal:  Proc Natl Acad Sci U S A       Date:  1993-12-15       Impact factor: 11.205

10.  Target prediction for small, noncoding RNAs in bacteria.

Authors:  Brian Tjaden; Sarah S Goodwin; Jason A Opdyke; Maude Guillier; Daniel X Fu; Susan Gottesman; Gisela Storz
Journal:  Nucleic Acids Res       Date:  2006-05-22       Impact factor: 16.971
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.