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Literature DB >> 3580642

Optimal sequence alignment using affine gap costs.

S F Altschul, B W Erickson.

Abstract

Mesh：

Substances：
DNA

Year: 1986 PMID： 3580642 DOI： 10.1007/bf02462326

Source DB: PubMed Journal: Bull Math Biol ISSN： 0092-8240 Impact factor: 1.758

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9 in total

1. Optimal sequence alignments.

Authors: W M Fitch; T F Smith
Journal: Proc Natl Acad Sci U S A Date: 1983-03 Impact factor: 11.205

2. A general method applicable to the search for similarities in the amino acid sequence of two proteins.

Authors: S B Needleman; C D Wunsch
Journal: J Mol Biol Date: 1970-03 Impact factor: 5.469

3. A nonlinear measure of subalignment similarity and its significance levels.

Authors: S F Altschul; B W Erickson
Journal: Bull Math Biol Date: 1986 Impact factor: 1.758

4. A fast homology program for aligning biological sequences.

Authors: P Taylor
Journal: Nucleic Acids Res Date: 1984-01-11 Impact factor: 16.971

5. Comparative biosequence metrics.

Authors: T F Smith; M S Waterman; W M Fitch
Journal: J Mol Evol Date: 1981 Impact factor: 2.395

6. An improved algorithm for matching biological sequences.

Authors: O Gotoh
Journal: J Mol Biol Date: 1982-12-15 Impact factor: 5.469

7. Efficient sequence alignment algorithms.

Authors: M S Waterman
Journal: J Theor Biol Date: 1984-06-07 Impact factor: 2.691

8. Structure and expression of a cloned cDNA for human interleukin-2.

Authors: T Taniguchi; H Matsui; T Fujita; C Takaoka; N Kashima; R Yoshimoto; J Hamuro
Journal: Nature Date: 1983 Mar 24-30 Impact factor: 49.962

9. Use of a cDNA expression vector for isolation of mouse interleukin 2 cDNA clones: expression of T-cell growth-factor activity after transfection of monkey cells.

Authors: T Yokota; N Arai; F Lee; D Rennick; T Mosmann; K Arai
Journal: Proc Natl Acad Sci U S A Date: 1985-01 Impact factor: 11.205

9 in total

45 in total

1. The estimation of statistical parameters for local alignment score distributions.

Authors: S F Altschul; R Bundschuh; R Olsen; T Hwa
Journal: Nucleic Acids Res Date: 2001-01-15 Impact factor: 16.971

Review 2. Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements.

Authors: A A Schäffer; L Aravind; T L Madden; S Shavirin; J L Spouge; Y I Wolf; E V Koonin; S F Altschul
Journal: Nucleic Acids Res Date: 2001-07-15 Impact factor: 16.971

3. Molecular cloning of a candidate chicken prion protein.

Authors: J M Gabriel; B Oesch; H Kretzschmar; M Scott; S B Prusiner
Journal: Proc Natl Acad Sci U S A Date: 1992-10-01 Impact factor: 11.205

4. Identification of a divergent M protein gene and an M protein-related gene family in Streptococcus pyogenes serotype 49.

Authors: E J Haanes; P P Cleary
Journal: J Bacteriol Date: 1989-12 Impact factor: 3.490

10. Coevolution of persistently infecting small DNA viruses and their hosts linked to host-interactive regulatory domains.

Authors: F F Shadan; L P Villarreal
Journal: Proc Natl Acad Sci U S A Date: 1993-05-01 Impact factor: 11.205