| Literature DB >> 34922574 |
Juntao Cui1,2, Suhan Zhao1,3, Yinghui Li1,2, Danyang Zhang1,2, Bingjing Wang1,2, Junxia Xie4, Jun Wang5,6.
Abstract
Regulated cell death (RCD) is a ubiquitous process in living organisms that is essential for tissue homeostasis or to restore biological balance under stress. Over the decades, various forms of RCD have been reported and are increasingly being found to involve in human pathologies and clinical outcomes. We focus on five high-profile forms of RCD, including apoptosis, pyroptosis, autophagy-dependent cell death, necroptosis and ferroptosis. Cumulative evidence supports that not only they have different features and various pathways, but also there are extensive cross-talks between modes of cell death. As the understanding of RCD pathway in evolution, development, physiology and disease continues to improve. Here we review an updated classification of RCD on the discovery and features of processes. The prominent focus will be placed on key mechanisms of RCD and its critical role in neurodegenerative disease. Video abstract.Entities:
Keywords: Apoptosis; Autophagy-dependent cell death; Ferroptosis; Necroptosis; Pyroptosis
Mesh:
Year: 2021 PMID: 34922574 PMCID: PMC8684172 DOI: 10.1186/s12964-021-00799-8
Source DB: PubMed Journal: Cell Commun Signal ISSN: 1478-811X Impact factor: 5.712
Fig. 1Overview of extrinsic and intrinsic pathway of apoptosis. External way of apoptosis is mediated by death receptor (DR). DR is activated by binding to the corresponding ligand, and is activated by the initial caspase (caspase-8) and the effector caspase (caspase-3/7), which eventually leads to cell apoptosis. After FasL binds to DR Fas, DR4 or DR5, it causes local oligomerization and activation of Fas molecules. Fas recruits Fas-related death domain protein (FADD) in its cytoplasm activated Caspases-8 and triggerd apoptosis. Tumor necrosis factor (TNF) receptor 1 (TNFR1) ligation recruits early complexes composed of TNFR1-associated death domain protein (TRADD) and receptor-interacting serine/threonine protein kinase 1 (RIPK1) and recruits caspase-8 and makes dimerization. Active caspase-8 cleaves downstream targets to activate two different pathways: directly cleaves the executioner caspases, caspase-3 and caspase-7, or engages the cell-intrinsic pathway to amplify executor caspase by processing BH3-only protein BID activation. Caspases-3 and Caspases-7 also regulate the permeability of the outer membrane permeabilization and the release of cytochrome C. In the intrinsic pathway, multiple stimuli that cause cellular stress or damage usually activate one or more members of the BH3-only protein family. BH3-only protein activation exceeding a critical threshold overcomes the inhibitory effect of anti-apoptotic B-cell lymphoma-2 (BCL-2) family members and promotes the assembly of BAK-BAX oligomers in the outer mitochondrial membrane. Activated BH3 protein activates BCL-2 antagonist/killer (BAK) and BCL-2 associated X protein (BAX) to induce mitochondrial outer membrane permeability and cytochrome C release. Cytochrome C binds and oligomerizes apoptotic protease-activating factor 1 (APAF1), which recruits and activates caspase-9. Cytochrome C and APAF1 combine to form an apoptosome that drive the activation of caspase-9, which stimulates caspase-3 and -7, and then induces apoptosis
Fig. 2Molecular mechanism of pyroptosis. Caspase-1-dependent pyroptosis requires activation of the canonical inflammasomes. In this pathway, pathogen-associated molecular patterns activate their respective inflammasome sensors, including NLRP3, NLRP1, NLRC4, AIM2, and Pyrin. These inflammasomes recruit ASC adaptors, and the NLR or AIM2 signaling domains are connected to the ASC through homotypic interactions which generates the formation of ASC focus. The ASC focus recruits procaspase-1, leading to the activation of caspase-1. Noncanonical inflammasome direct recognition of the cytosolic lipopolysaccharide (LPS), which is derived from gram negative bacteria and can directly bind to and active caspase-4/5/11. GSDMD is the direct substrate of caspase-1/4/5/11, which can be specifically cleaved by inflammatory caspase and plays an important role in the downstream of inflammatory caspase. GSDMD exists in an autoinhibitory conformation at homeostasis, in which the inhibitory C terminal domain (C-GSDMD) retains the pore-forming N terminal domain (N-GSDMD) in an inactive state. Upon processing by the activated caspases, the GSDMD N terminal is released and translocated to the inner plasma membrane. Activated caspase-1 also cleave and activate the proinflammatory cytokines interleukin (IL)-1β and IL-18, which are released through GSDMD pores
Fig. 3Schematic pathways of mammalian autophagy. In macroautophagy, the initiation of autophagy begins with the formation of the phagophore assembly site (PAS) and signals the activity of the vacuolar protein sorting 34 (VPS34) complex. Further nucleation requires a class III PI3K complex, which is composed of VPS34, PI3K and beclin-1. PE- conjugated LC3 (LC3-PE) is necessary for autophagic membrane expansion, recognition of autophagic substances, and fusion of autophagosomes with lysosomes. The resulting autophagosomes fuse with endocytosis and lysosomal compartments, ultimately leading to the formation of autolysosome. In microautophagy, the substrate is directly swallowed by the boundary of the lysosomal membrane. Then, the sequestration of cargo forms a lumenal vesicle by the protrusion and/or invagination of the vacuolar membrane. This vesicle is subsequently degraded by vacuolar hydrolases releasing simple decomposition products. In chaperone-mediated autophagy, the substrate with the pentapeptide motif KFERQ is selectively recognized by the heat shock cognate 70 kDa protein (HSC70) molecular chaperone and translocates to the lysosome in a LAMP2A-dependent manner. Proteins with exposed KFERQ or KFERQ-like motifs are recognized and bound by HSC70. The complex then localizes to the lysosomal membrane where the multimerization of LAMP2A allows the formation of aconitum to delivery the protein into the lysosomal lumen, a process facilitated by the lumenal chaperone HSP90
Fig. 4Schematic presentation of necroptosis pathway induced by tumor necrosis factor (TNF). The binding of TNF to its cognate receptor TNFR1 triggers the assembly of complex I, which includes TNFR1, TNFR1-associated death domain (TRADD), receptor-interacting serine/threonine protein kinase 1 (RIPK1), TNFR-associated factor 2 ( TRAF2), cellular inhibitor of apoptosis protein 1/2 (cIAP1/2), and linear ubiquitin chain assembly complex (LUBAC). Complex I provides a platform for a series of ubiquitination and deubiquitination reactions. This ubiquitination is related to nuclear factor-κB (NF-κB) or the decision between survival signals and cell death signals. Subsequently, the ubiquitination of RIPK1 by cIAP1 and cIAP2 stabilized complex I and made the further recruitment of additional factors. The cytoplasmic death-inducing signal complex composed of RIPK1/3, MLKL, caspase-8 and FAS- associated death domain protein (FADD) is called complex II. When RIPK3 and MLKL levels are sufficiently high and caspase-8 activity is inhibited, complex II may evolve to form necrosome. Upon receipt of a necroptosis-inducing stimulus, RIPK1 phosphorylates and activates RIPK3, which in turn phosphorylates and activates MLKL, forming a complex called necrosome. Then, MLKL is recruited and phosphorylated by RIPK3 to form active oligomers. The executor of necroptosis is MLKL, there are two non-exclusive models are proposed for the mechanism of MLKL. One could act directly as a direct pore-forming complex that is recruited through binding of the amino-terminus, another could act indirectly by serving as a platform that deregulates Ca2+ or Na+ ion channels
Fig. 5Ferroptosis is a novel form of cell death dependent on iron and lipid peroxidation. Inhibition of system Xc- and glutathione peroxidase 4 (GPX4) causes ferroptosis. Glutamate receptors activate or inhibit the Xc- system, the glutamate/cystine antiporter, which can cause glutamate-induced toxicity. The uptake of extracellular cysteine in the form of cystine is a key step in the synthesis of GSH, and GSH generation and maintenance is significant for preventing cells from the damaged oxidative stress responses. The depletion of glutathione or GSH levels affect the function of GPX4, which is a member of the GSH peroxidases. GPX4 inactivation gives rise to the accumulation of lipid peroxides and ferroptosis. Blocking up lipid peroxidation and iron chelation are the inhibitor of ferroptosis. Small-molecule inducers of ferroptosis are colored red, small-molecule inhibitors of ferroptosis are colored green
Fig. 6Signaling pathway mediated by ferritinophagy. In condition of starvation or iron depletion in the cell, ferritinophagy identifies nuclear receptor co-activator 4 (NCOA4) as a specific autophagy cargo receptor, binds ferritin and targets it for lysosomal degradation. Ferritin is a major intracellular iron storage protein complex, which includes ferritin light chain (FTL) and ferritin heavy chain 1 (FTH1). NCOA4 is a cargo receptor that recruits ferritin to autophagosome by binding FTH1 and sequesters ferritin complexes into autophagosomes by binding to microtubule-associated protein 1 light chain 3-phosphatidylethanolamine (LC3-PE) with developing double-membrane of autophagosome. As autophagosome fully matured and fusion with the lysosome which releases hydrolase, both NCOA4 and ferritin are degraded in autolysosome, consequently releasing bioavailable iron
Comparison of different types of cell death
| Type of cell death | Induction factor | Executioner | Morphological features | Biochemical halmarkers | Plasma membrane and nucleus | Chromatin | Other unique feature | Inflammatory reaction | Pharmacological inhibition |
|---|---|---|---|---|---|---|---|---|---|
| Apoptosis | Initiator caspases (caspase-2/8/9/10) | Executioner caspases (caspase-3/6/7) | Cellular shrinkage, dense cytoplasm, tightly packed organelles, apoptotic body formation | Activation of initiator and executioner caspases | Cell shrinkage, the plasma membrane with preserved integrity and nuclear compaction and fragmentation | Marked chromatin condensation | Apoptosome | No inflammatory reaction | Caspase-8 inhibitor, pan-caspase inhibitors |
| Pyroptosis | Inflammatory caspase | GSDMD | Rupture of plasma membrane, chromatin condensation, blebbing of the cell membrane | Inflammatory caspase activation (caspase-1 and caspase-11/4/5) | Rapidly plasma-membrane rupture, cell swelling | DNA fragmentation without nuclear condensation | Inflammasome | Lytic inflammatory reaction | Inflammasome inhibitor (MCC950, Bay 1 1–7082, JC-124), pan-caspase inhibitors, caspase-1 inhibitor |
| Autophagy-dependent cell death | Formation of PAS (pro-autophagosome) | Lysosomes | Focal plasma membrane rupture, autophagosome with a double-membrane, mild moderate chromatin condensation | Dependency on autophagy machinery | Focal plasma membrane rupture | Mild moderate chromatin condensation | Autophagosome | No inflammatory reaction | Autosis inhibitors |
| Necroptosis | TNT, TN'FRl, FAS, TRAILR1 | MLKL | Cellular swelling, dense cytoplasm, tightly packed organelles | RIPK activation | Cell swelling; plasma membrane rupture; organelle swelling | Mild moderate chromatin condensation | Necrosomes | Inflammatory reaction | RIP1 inhibitors lnecrostaiin-1). RIP3 inhibitors (GSKS43. GSK-872).MLKL inhibitor |
| Ferroptosis | Erastin, (1S, 3R)-RSL3 | Lipid peroxidation | Iron and reactive oxygen species (ROS) dependent, decreased or vanishing mitochondrial crista, a condensed mitochondrial membrane, and a ruptured outer mitochondrial membrane | Glutathione Peroxidase inactivation, iron-dependent ROS accumulation | Cell volume shrinkage and increased mitochondrial membrane density | Chromatin fragmentation | Accumulation of intracellular ROS | Inflammatory reaction | Iron chelators, (deferoxamine, DFO), lipid peroxidation inhibitors, vitamin E, ferrostatin-1 (Fer-1), and liproxstatin-1 (Lip-1) |