Literature DB >> 34653286

Control of Protonated Schiff Base Excited State Decay within Visual Protein Mimics: A Unified Model for Retinal Chromophores.

Baptiste Demoulin1, Margherita Maiuri2, Tetyana Berbasova3, James H Geiger3, Babak Borhan3, Marco Garavelli4, Giulio Cerullo2, Ivan Rivalta1,4.   

Abstract

Artificial biomimetic chromophore-protein complexes inspired by natural visual pigments can feature color tunability across the full visible spectrum. However, control of excited state dynamics of the retinal chromophore, which is of paramount importance for technological applications, is lacking due to its complex and subtle photophysics/photochemistry. Here, ultrafast transient absorption spectroscopy and quantum mechanics/molecular mechanics simulations are combined for the study of highly tunable rhodopsin mimics, as compared to retinal chromophores in solution. Conical intersections and transient fluorescent intermediates are identified with atomistic resolution, providing unambiguous assignment of their ultrafast excited state absorption features. The results point out that the electrostatic environment of the chromophore, modified by protein point mutations, affects its excited state properties allowing control of its photophysics with same power of chemical modifications of the chromophore. The complex nature of such fine control is a fundamental knowledge for the design of bio-mimetic opto-electronic and photonic devices.
© 2021 The Authors. Chemistry - A European Journal published by Wiley-VCH GmbH.

Entities:  

Keywords:  QM/MM methods; excited state dynamics; retinal Schiff base; rhodopsin mimics; ultrafast optical spectroscopy

Mesh:

Substances:

Year:  2021        PMID: 34653286      PMCID: PMC8906800          DOI: 10.1002/chem.202102383

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  45 in total

1.  Development and testing of a general amber force field.

Authors:  Junmei Wang; Romain M Wolf; James W Caldwell; Peter A Kollman; David A Case
Journal:  J Comput Chem       Date:  2004-07-15       Impact factor: 3.376

2.  Molcas 8: New capabilities for multiconfigurational quantum chemical calculations across the periodic table.

Authors:  Francesco Aquilante; Jochen Autschbach; Rebecca K Carlson; Liviu F Chibotaru; Mickaël G Delcey; Luca De Vico; Ignacio Fdez Galván; Nicolas Ferré; Luis Manuel Frutos; Laura Gagliardi; Marco Garavelli; Angelo Giussani; Chad E Hoyer; Giovanni Li Manni; Hans Lischka; Dongxia Ma; Per Åke Malmqvist; Thomas Müller; Artur Nenov; Massimo Olivucci; Thomas Bondo Pedersen; Daoling Peng; Felix Plasser; Ben Pritchard; Markus Reiher; Ivan Rivalta; Igor Schapiro; Javier Segarra-Martí; Michael Stenrup; Donald G Truhlar; Liviu Ungur; Alessio Valentini; Steven Vancoillie; Valera Veryazov; Victor P Vysotskiy; Oliver Weingart; Felipe Zapata; Roland Lindh
Journal:  J Comput Chem       Date:  2015-11-12       Impact factor: 3.376

3.  Solvent Effects on the Radiative and Nonradiative Decay of a Model of the Rhodopsin Chromophore.

Authors:  Aurora Muñoz-Losa; M Elena Martín; Ignacio Fdez Galván; M Luz Sánchez; Manuel A Aguilar
Journal:  J Chem Theory Comput       Date:  2011-11-22       Impact factor: 6.006

4.  Structure, spectroscopy, and spectral tuning of the gas-phase retinal chromophore: the beta-ionone "handle" and alkyl group effect.

Authors:  Alessandro Cembran; Remedios Gonzalez-Luque; Piero Altoè; Manuela Merchan; Fernando Bernardi; Massimo Olivucci; Marco Garavelli
Journal:  J Phys Chem A       Date:  2005-07-28       Impact factor: 2.781

5.  Probing and modeling the absorption of retinal protein chromophores in vacuo.

Authors:  Jyoti Rajput; Dennis B Rahbek; Lars H Andersen; Amiram Hirshfeld; Mordechai Sheves; Piero Altoè; Giorgio Orlandi; Marco Garavelli
Journal:  Angew Chem Int Ed Engl       Date:  2010-03-01       Impact factor: 15.336

Review 6.  Chemical dynamics in proteins: the photoisomerization of retinal in bacteriorhodopsin.

Authors:  F Gai; K C Hasson; J C McDonald; P A Anfinrud
Journal:  Science       Date:  1998-03-20       Impact factor: 47.728

7.  Wavepacket splitting and two-pathway deactivation in the photoexcited visual pigment isorhodopsin.

Authors:  Dario Polli; Oliver Weingart; Daniele Brida; Emiliano Poli; Margherita Maiuri; Katelyn M Spillane; Andrea Bottoni; Philipp Kukura; Richard A Mathies; Giulio Cerullo; Marco Garavelli
Journal:  Angew Chem Int Ed Engl       Date:  2014-01-31       Impact factor: 15.336

8.  The origin of absorptive features in the two-dimensional electronic spectra of rhodopsin.

Authors:  Marwa H Farag; Thomas L C Jansen; Jasper Knoester
Journal:  Phys Chem Chem Phys       Date:  2018-05-09       Impact factor: 3.676

9.  Tuning the Protein-Induced Absorption Shifts of Retinal in Engineered Rhodopsin Mimics.

Authors:  Carl-Mikael Suomivuori; Lucas Lang; Dage Sundholm; Ana P Gamiz-Hernandez; Ville R I Kaila
Journal:  Chemistry       Date:  2016-04-27       Impact factor: 5.236

10.  How Methylation Modifies the Photophysics of the Native All- trans-Retinal Protonated Schiff Base: A CASPT2/MD Study in Gas Phase and in Methanol.

Authors:  Rute Barata-Morgado; M Luz Sánchez; Aurora Muñoz-Losa; M Elena Martín; Francisco J Olivares Del Valle; Manuel A Aguilar
Journal:  J Phys Chem A       Date:  2018-03-12       Impact factor: 2.781

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  1 in total

Review 1.  Rhodopsins: An Excitingly Versatile Protein Species for Research, Development and Creative Engineering.

Authors:  Willem J de Grip; Srividya Ganapathy
Journal:  Front Chem       Date:  2022-06-22       Impact factor: 5.545

  1 in total

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