Literature DB >> 20104555

Probing and modeling the absorption of retinal protein chromophores in vacuo.

Jyoti Rajput1, Dennis B Rahbek, Lars H Andersen, Amiram Hirshfeld, Mordechai Sheves, Piero Altoè, Giorgio Orlandi, Marco Garavelli.   

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Year:  2010        PMID： 20104555     DOI： 10.1002/anie.200905061

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


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  10 in total

1.  Action and Ion Mobility Spectroscopy of a Shortened Retinal Derivative.

Authors:  Lihi Musbat; Shirrel Assis; Jonathan M Dilger; Tarick J El-Baba; Daniel R Fuller; Jeppe Langeland Knudsen; Hjalte V Kiefer; Amiram Hirshfeld; Noga Friedman; Lars H Andersen; Mordechai Sheves; David E Clemmer; Yoni Toker
Journal:  J Am Soc Mass Spectrom       Date:  2018-07-30       Impact factor: 3.109

2.  Control of Protonated Schiff Base Excited State Decay within Visual Protein Mimics: A Unified Model for Retinal Chromophores.

Authors:  Baptiste Demoulin; Margherita Maiuri; Tetyana Berbasova; James H Geiger; Babak Borhan; Marco Garavelli; Giulio Cerullo; Ivan Rivalta
Journal:  Chemistry       Date:  2021-10-28       Impact factor: 5.236

Review 3.  The photochemical determinants of color vision: revealing how opsins tune their chromophore's absorption wavelength.

Authors:  Wenjing Wang; James H Geiger; Babak Borhan
Journal:  Bioessays       Date:  2013-10-24       Impact factor: 4.345

4.  Tuning the electronic absorption of protein-embedded all-trans-retinal.

Authors:  Wenjing Wang; Zahra Nossoni; Tetyana Berbasova; Camille T Watson; Ipek Yapici; Kin Sing Stephen Lee; Chrysoula Vasileiou; James H Geiger; Babak Borhan
Journal:  Science       Date:  2012-12-07       Impact factor: 47.728

5.  Molecular mechanism of long-range synergetic color tuning between multiple amino acid residues in conger rhodopsin.

Authors:  Hiroshi C Watanabe; Yoshiharu Mori; Takashi Tada; Shozo Yokoyama; Takahisa Yamato
Journal:  Biophysics (Oxf)       Date:  2010-01-01

6.  Atomistic design of microbial opsin-based blue-shifted optogenetics tools.

Authors:  Hideaki E Kato; Motoshi Kamiya; Seiya Sugo; Jumpei Ito; Reiya Taniguchi; Ayaka Orito; Kunio Hirata; Ayumu Inutsuka; Akihiro Yamanaka; Andrés D Maturana; Ryuichiro Ishitani; Yuki Sudo; Shigehiko Hayashi; Osamu Nureki
Journal:  Nat Commun       Date:  2015-05-15       Impact factor: 14.919

7.  Full-Quantum chemical calculation of the absorption maximum of bacteriorhodopsin: a comprehensive analysis of the amino acid residues contributing to the opsin shift.

Authors:  Tomohiko Hayashi; Azuma Matsuura; Hiroyuki Sato; Minoru Sakurai
Journal:  Biophysics (Nagoya-shi)       Date:  2012-07-27

8.  Modelling time-resolved two-dimensional electronic spectroscopy of the primary photoisomerization event in rhodopsin.

Authors:  Ivan Rivalta; Artur Nenov; Oliver Weingart; Giulio Cerullo; Marco Garavelli; Shaul Mukamel
Journal:  J Phys Chem B       Date:  2014-05-08       Impact factor: 2.991

9.  Predicting peak spectral sensitivities of vertebrate cone visual pigments using atomistic molecular simulations.

Authors:  Jagdish Suresh Patel; Celeste J Brown; F Marty Ytreberg; Deborah L Stenkamp
Journal:  PLoS Comput Biol       Date:  2018-01-24       Impact factor: 4.475

10.  Short-wavelength-sensitive 2 (Sws2) visual photopigment models combined with atomistic molecular simulations to predict spectral peaks of absorbance.

Authors:  Dharmeshkumar Patel; Jonathan E Barnes; Wayne I L Davies; Deborah L Stenkamp; Jagdish Suresh Patel
Journal:  PLoS Comput Biol       Date:  2020-10-21       Impact factor: 4.475
  10 in total

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