Literature DB >> 3458181

The crystal structures of [Met5]enkephalin and a third form of [Leu5]enkephalin: observations of a novel pleated beta-sheet.

J F Griffin, D A Langs, G D Smith, T L Blundell, I J Tickle, S Bedarkar.   

Abstract

The structures of [Met5]enkephalin (Tyr-Gly-Gly-Phe-Met) and [Leu5]enkephalin (Tyr-Gly-Gly-Phe-Leu) have been determined from single crystal x-ray diffraction data and refined to residuals of 0.100 and 0.092, respectively. The [Met5]enkephalin structure consists of dimers forming antiparallel beta-sheets extending in the monoclinic ac plane with 10.6 water molecules per dimer. The two molecules, related by pseudo two-fold axes, have similar backbone conformations and similar tyrosine and phenylalanine side-chain conformations. Both methionine residues are disordered and the disorder is different in the two independent molecules. Additional hydrogen bonds connect adjacent dimers to form infinite sheets normal to the b axis. The water molecules are found mainly in the interstices between the sheets. [Leu5]Enkephalin crystallizes as a monohydrate that is isomorphous with the [Met5]enkephalin structure with respect to the beta-sheet but different with respect to the tyrosine and phenylalanine side-chain conformations and water content. The peptide chains in both structures are fully extended and more nearly planar than pleated. The planes of the peptide chains in the dimers form an angle of 143.3 degrees with one another in [Met5]enkephalin and 156.0 degrees in [Leu5]enkephalin. This produces a zigzag pattern or pleat in the beta-sheets perpendicular to the direction of the peptide chains and, therefore, perpendicular to the normal beta-sheet pleat. The average repeat distance between Ni and Ni+2 in the peptide chains of both structures is 7.10 A, versus an ideal value of 6.68 A.

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Year:  1986        PMID: 3458181      PMCID: PMC323495          DOI: 10.1073/pnas.83.10.3272

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

1.  Configurations of Polypeptide Chains With Favored Orientations Around Single Bonds: Two New Pleated Sheets.

Authors:  L Pauling; R B Corey
Journal:  Proc Natl Acad Sci U S A       Date:  1951-11       Impact factor: 11.205

2.  Conformation of [Leu5]enkephalin from X-ray diffraction: features important for recognition at opiate receptor.

Authors:  D Smith; J F Griffin
Journal:  Science       Date:  1978-03-17       Impact factor: 47.728

3.  Crystal structure of leucine-enkephalin.

Authors:  A Camerman; D Mastropaolo; I Karle; J Karle; N Camerman
Journal:  Nature       Date:  1983 Dec 1-7       Impact factor: 49.962

4.  Correlation between circular dichroism data and biological activities of 2,5 substituted enkephalin analogues.

Authors:  J Soós; I Berzétei; S Bajusz; A Z Rónai
Journal:  Life Sci       Date:  1980-07-14       Impact factor: 5.037

5.  Conformation of amino acid side-chains in proteins.

Authors:  J Janin; S Wodak
Journal:  J Mol Biol       Date:  1978-11-05       Impact factor: 5.469

6.  Conformational and geometrical properties of beta-sheets in proteins. II. Antiparallel and mixed beta-sheets.

Authors:  F R Salemme; D W Weatherford
Journal:  J Mol Biol       Date:  1981-02-15       Impact factor: 5.469

7.  Structure of beta-sheets. Origin of the right-handed twist and of the increased stability of antiparallel over parallel sheets.

Authors:  K C Chou; M Pottle; G Némethy; Y Ueda; H A Scheraga
Journal:  J Mol Biol       Date:  1982-11-25       Impact factor: 5.469

8.  Enkephalin related fragments. Conformational studies of the tetrapeptides Tyr-Gly-Gly-Phe and Gly-Gly-Phe-X (X = Leu, Met) by X-ray and 1H NMR spectroscopy.

Authors:  M C Fournie Zaluski; T Prange; C Pascard; B P Roques
Journal:  Biochem Biophys Res Commun       Date:  1977-12-21       Impact factor: 3.575

9.  Identification of two related pentapeptides from the brain with potent opiate agonist activity.

Authors:  J Hughes; T W Smith; H W Kosterlitz; L A Fothergill; B A Morgan; H R Morris
Journal:  Nature       Date:  1975-12-18       Impact factor: 49.962

10.  Preliminary analysis of 1H and 13C spectral and relaxation behavior in methionine-enkephalin.

Authors:  H E Bleich; J D Cutnell; A R Day; R J Freer; J A Glasel; J F McKelvy
Journal:  Proc Natl Acad Sci U S A       Date:  1976-08       Impact factor: 11.205

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  16 in total

1.  Enhanced sampling of the molecular potential energy surface using mutually orthogonal latin squares: application to peptide structures.

Authors:  K Vengadesan; N Gautham
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

2.  NCAD, a database integrating the intrinsic conformational preferences of non-coded amino acids.

Authors:  Guillem Revilla-López; Juan Torras; David Curcó; Jordi Casanovas; M Isabel Calaza; David Zanuy; Ana I Jiménez; Carlos Cativiela; Ruth Nussinov; Piotr Grodzinski; Carlos Alemán
Journal:  J Phys Chem B       Date:  2010-06-03       Impact factor: 2.991

3.  A multidimensional 1H NMR investigation of the conformation of methionine-enkephalin in fast-tumbling bicelles.

Authors:  Isabelle Marcotte; Frances Separovic; Michèle Auger; Stéphane M Gagné
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

4.  Exploring the Backbone of Enkephalins To Adjust Their Pharmacological Profile for the δ-Opioid Receptor.

Authors:  Arnaud Proteau-Gagné; Véronique Bournival; Kristina Rochon; Yves L Dory; Louis Gendron
Journal:  ACS Chem Neurosci       Date:  2010-09-17       Impact factor: 4.418

5.  Characterization of low-energy conformational domains for Met-enkephalin.

Authors:  J J Perez; H O Villar; G H Loew
Journal:  J Comput Aided Mol Des       Date:  1992-04       Impact factor: 3.686

6.  The role of crystallography in drug design.

Authors:  Jeffrey R Deschamps
Journal:  AAPS J       Date:  2005-12-07       Impact factor: 4.009

7.  Conformational stability and three-dimensional model of the delta-opioid pharmacophore for the extended antiparallel dimer structure of Met-enkephalin in water.

Authors:  Yng-Ching Wu; Jin-Yuan Hsieh; Hong-Chang Lin; Chi-Chuan Hwang
Journal:  J Mol Model       Date:  2006-09-14       Impact factor: 1.810

Review 8.  Exploring conformational space using a mean field technique with MOLS sampling.

Authors:  P Arun Prasad; V Kanagasabai; J Arunachalam; N Gautham
Journal:  J Biosci       Date:  2007-08       Impact factor: 1.826

9.  A supermolecule study of the effect of hydration on the conformational behaviour of leucine-enkephalin.

Authors:  I N Demetropoulos; N Gresh
Journal:  J Comput Aided Mol Des       Date:  1991-04       Impact factor: 3.686

10.  Preparation and evaluation at the delta opioid receptor of a series of linear leu-enkephalin analogues obtained by systematic replacement of the amides.

Authors:  Kristina Rochon; Arnaud Proteau-Gagné; Philippe Bourassa; Jean-François Nadon; Jérome Côté; Véronique Bournival; Fernand Gobeil; Brigitte Guérin; Yves L Dory; Louis Gendron
Journal:  ACS Chem Neurosci       Date:  2013-05-20       Impact factor: 4.418

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