Literature DB >> 1869900

A supermolecule study of the effect of hydration on the conformational behaviour of leucine-enkephalin.

I N Demetropoulos1, N Gresh.   

Abstract

A theoretical conformational study was performed on leu-enkephalin in its zwitterionic form, both in vacuo and in the presence of a number, n, of up to 13 water molecules saturating its first hydration shell. The intramolecular energy of enkephalin as well as the intermolecular enkephalin-water and water-water interaction energies were computed with the SIBFA procedure (Sum of Interactions Between Fragments Ab initio computed), which uses additive ab initio multipole systematics and analytical formulas grounded on ab initio SCF computations. Energy minimizations were performed with a polyvalent minimizer, Merlin, with which three distinct derivative and three distinct nonderivative minimizers can be activated in a sequential fashion. Eight different candidate conformations of enkephalin were used as starting points. These conformations are either those found in distinct X-ray structures, or those proposed on the basis of theoretical computations by other authors. In the absence of hydration, they converged towards distinct folded energy-minima, the best four ones being separated by an energy gap of 8.7 kcal/mol. In marked contrast, with up to n = 13, the energetical separation between the six best conformers narrowed down to congruent to 4 kcal/mol. They can be characterized by: (a) either a direct or a water-mediated ammonium-carboxylate interaction; b) either a close proximity (as in morphine) or a large separation between the aromatic rings of Tyr and Phe (intercenter separations of congruent to 4.5 A and congruent to 10.5 A, respectively), with each of the four mutual combinations of (a) and (b) being represented.

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Year:  1991        PMID: 1869900     DOI: 10.1007/bf00129748

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  37 in total

1.  Evidence for topographical analogy between methionine-enkephalin and morphine derivatives.

Authors:  P W Schiller; C F Yam; M Lis
Journal:  Biochemistry       Date:  1977-05-03       Impact factor: 3.162

2.  Conformation of [Leu5]enkephalin from X-ray diffraction: features important for recognition at opiate receptor.

Authors:  D Smith; J F Griffin
Journal:  Science       Date:  1978-03-17       Impact factor: 47.728

3.  Mechanism of inhibition of mitochondrial enzymatic complex I-III by adriamycin derivatives.

Authors:  E Goormaghtigh; P Huart; R Brasseur; J M Ruysschaert
Journal:  Biochim Biophys Acta       Date:  1986-09-25

4.  Proposal for the biologically active conformation of opiates and enkephalin.

Authors:  F A Gorin; G R Marshall
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

5.  The crystal structures of [Met5]enkephalin and a third form of [Leu5]enkephalin: observations of a novel pleated beta-sheet.

Authors:  J F Griffin; D A Langs; G D Smith; T L Blundell; I J Tickle; S Bedarkar
Journal:  Proc Natl Acad Sci U S A       Date:  1986-05       Impact factor: 11.205

6.  Theoretical conformational analysis of Met-enkephalin.

Authors:  J L De Coen; C Humblet; M H Koch
Journal:  FEBS Lett       Date:  1977-01-15       Impact factor: 4.124

7.  Crystal structure of leucine-enkephalin.

Authors:  A Camerman; D Mastropaolo; I Karle; J Karle; N Camerman
Journal:  Nature       Date:  1983 Dec 1-7       Impact factor: 49.962

8.  Proposals for the mu-active conformation of the enkephalin analog Tyr-cyclol(-N gamma-D-A2-bu-Gly-Phe-Leu-).

Authors:  B Maigret; M C Fournie-Zaluski; B Roques; S Premilat
Journal:  Mol Pharmacol       Date:  1986-03       Impact factor: 4.436

Review 9.  A theoretical study of the aqueous hydration of canonical B d(CGCGAATTCGCG): Monte Carlo simulation and comparison with crystallographic ordered water sites.

Authors:  P S Subramanian; D L Beveridge
Journal:  J Biomol Struct Dyn       Date:  1989-06

10.  1H and 13C NMR studies of conformational behaviour of Leu-enkephalin.

Authors:  C Garbay-Jaureguiberry; B P Roques; R Oberlin
Journal:  FEBS Lett       Date:  1977-04-01       Impact factor: 4.124

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