Literature DB >> 34286018

Xenopus laevis Oocytes Preparation for in-Cell EPR Spectroscopy.

Laura John1, Malte Drescher1.   

Abstract

One of the most exciting perspectives for studying bio-macromolecules comes from the emerging field of in-cell spectroscopy, which enables to determine the structure and dynamics of bio-macromolecules in the cell. In-cell electron paramagnetic resonance (EPR) spectroscopy in combination with micro-injection of bio-macromolecules into Xenopus laevis oocytes is ideally suited for this purpose. Xenopus laevis oocytes are a commonly used eukaryotic cell model in different fields of biology, such as cell- and development-biology. For in-cell EPR, the bio-macromolecules of interest are microinjected into the Xenopus laevis oocytes upon site-directed spin labeling. The sample solution is filled into a thin glass capillary by means of Nanoliter Injector and after that microinjected into the dark animal part of the Xenopus laevis oocytes by puncturing the membrane cautiously. Afterwards, three or five microinjected Xenopus laevis oocytes, depending on the kind of the final in-cell EPR experiment, are loaded into a Q-band EPR sample tube followed by optional shock-freezing (for experiment in frozen solution) and measurement (either at cryogenic or physiological temperatures) after the desired incubation time. The incubation time is limited due to cytotoxic effects of the microinjected samples and the stability of the paramagnetic spin label in the reducing cellular environment. Both aspects are quantified by monitoring cell morphology and reduction kinetics.
Copyright © 2018 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  Dynamics of biomacromolecules; Microinjection; Site-directed spin labeling; Xenopus laevis oocytes ; in vivo structure determination ; in-Cell EPR; in-Cell spectroscopy

Year:  2018        PMID: 34286018      PMCID: PMC8275282          DOI: 10.21769/BioProtoc.2798

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  13 in total

1.  Pulsed EPR spectroscopy distance measurements of DNA internally labelled with Gd(3+)-DOTA.

Authors:  Filip Wojciechowski; Andreas Groß; Isabelle T Holder; Laura Knörr; Malte Drescher; Jörg S Hartig
Journal:  Chem Commun (Camb)       Date:  2015-08-03       Impact factor: 6.222

2.  Xenopus laevis: Practical uses in cell and molecular biology. Injections of oocytes and embryos.

Authors:  B K Kay
Journal:  Methods Cell Biol       Date:  1991       Impact factor: 1.441

3.  Long-range distance measurements on nucleic acids in cells by pulsed EPR spectroscopy.

Authors:  Ivan Krstić; Robert Hänsel; Olga Romainczyk; Joachim W Engels; Volker Dötsch; Thomas F Prisner
Journal:  Angew Chem Int Ed Engl       Date:  2011-04-19       Impact factor: 15.336

4.  Long-range distance determination in a DNA model system inside Xenopus laevis oocytes by in-cell spin-label EPR.

Authors:  Mykhailo Azarkh; Oliver Okle; Vijay Singh; Isabelle T Seemann; Jörg S Hartig; Daniel R Dietrich; Malte Drescher
Journal:  Chembiochem       Date:  2011-07-01       Impact factor: 3.164

5.  Site-directed spin-labeling of nucleotides and the use of in-cell EPR to determine long-range distances in a biologically relevant environment.

Authors:  Mykhailo Azarkh; Vijay Singh; Oliver Okle; Isabelle T Seemann; Daniel R Dietrich; Jörg S Hartig; Malte Drescher
Journal:  Nat Protoc       Date:  2012-12-20       Impact factor: 13.491

6.  Translation of exogenous messenger RNA coding for nicotinic acetylcholine receptors produces functional receptors in Xenopus oocytes.

Authors:  E A Barnard; R Miledi; K Sumikawa
Journal:  Proc R Soc Lond B Biol Sci       Date:  1982-05-22

7.  Expression of functional acetylcholine receptor from cloned cDNAs.

Authors:  M Mishina; T Kurosaki; T Tobimatsu; Y Morimoto; M Noda; T Yamamoto; M Terao; J Lindstrom; T Takahashi; M Kuno
Journal:  Nature       Date:  1984 Feb 16-22       Impact factor: 49.962

8.  A Bioresistant Nitroxide Spin Label for In-Cell EPR Spectroscopy: In Vitro and In Oocytes Protein Structural Dynamics Studies.

Authors:  Ganesan Karthikeyan; Alessio Bonucci; Gilles Casano; Guillaume Gerbaud; Sébastien Abel; Virginie Thomé; Laurent Kodjabachian; Axel Magalon; Bruno Guigliarelli; Valérie Belle; Olivier Ouari; Elisabetta Mileo
Journal:  Angew Chem Int Ed Engl       Date:  2018-01-08       Impact factor: 15.336

9.  Distance determination in proteins inside Xenopus laevis oocytes by double electron-electron resonance experiments.

Authors:  Ryuji Igarashi; Tomomi Sakai; Hideyuki Hara; Takeshi Tenno; Toshiaki Tanaka; Hidehito Tochio; Masahiro Shirakawa
Journal:  J Am Chem Soc       Date:  2010-06-23       Impact factor: 15.419

Review 10.  Xenopus laevis in developmental and molecular biology.

Authors:  I B Dawid; T D Sargent
Journal:  Science       Date:  1988-06-10       Impact factor: 47.728

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