Literature DB >> 29227566

A Bioresistant Nitroxide Spin Label for In-Cell EPR Spectroscopy: In Vitro and In Oocytes Protein Structural Dynamics Studies.

Ganesan Karthikeyan1, Alessio Bonucci2, Gilles Casano1, Guillaume Gerbaud2, Sébastien Abel1, Virginie Thomé3, Laurent Kodjabachian3, Axel Magalon4, Bruno Guigliarelli2, Valérie Belle2, Olivier Ouari1, Elisabetta Mileo2.   

Abstract

Approaching protein structural dynamics and protein-protein interactions in the cellular environment is a fundamental challenge. Owing to its absolute sensitivity and to its selectivity to paramagnetic species, site-directed spin labeling (SDSL) combined with electron paramagnetic resonance (EPR) has the potential to evolve into an efficient method to follow conformational changes in proteins directly inside cells. Until now, the use of nitroxide-based spin labels for in-cell studies has represented a major hurdle because of their short persistence in the cellular context. The design and synthesis of the first maleimido-proxyl-based spin label (M-TETPO) resistant towards reduction and being efficient to probe protein dynamics by continuous wave and pulsed EPR is presented. In particular, the extended lifetime of M-TETPO enabled the study of structural features of a chaperone in the absence and presence of its binding partner at endogenous concentration directly inside cells.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  EPR spectroscopy; chaperone proteins; in-cell spectroscopy; nitroxide; site-directed spin labeling

Mesh:

Substances:

Year:  2018        PMID: 29227566     DOI: 10.1002/anie.201710184

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  25 in total

1.  Stability of the nitroxide biradical AMUPol in intact and lysed mammalian cells.

Authors:  Rupam Ghosh; Rania Dumarieh; Yiling Xiao; Kendra K Frederick
Journal:  J Magn Reson       Date:  2022-01-31       Impact factor: 2.229

2.  In-cell destabilization of a homodimeric protein complex detected by DEER spectroscopy.

Authors:  Yin Yang; Shen-Na Chen; Feng Yang; Xia-Yan Li; Akiva Feintuch; Xun-Cheng Su; Daniella Goldfarb
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-11       Impact factor: 11.205

3.  Xenopus laevis Oocytes Preparation for in-Cell EPR Spectroscopy.

Authors:  Laura John; Malte Drescher
Journal:  Bio Protoc       Date:  2018-04-05

4.  Cleavage-Resistant Protein Labeling With Hydrophilic Trityl Enables Distance Measurements In-Cell.

Authors:  Zikri Hasanbasri; Kevin Singewald; Teresa D Gluth; Benoit Driesschaert; Sunil Saxena
Journal:  J Phys Chem B       Date:  2021-05-13       Impact factor: 3.466

5.  Conformational Flexibility of the Protein Insertase BamA in the Native Asymmetric Bilayer Elucidated by ESR Spectroscopy.

Authors:  Aathira Gopinath; Benesh Joseph
Journal:  Angew Chem Int Ed Engl       Date:  2021-12-02       Impact factor: 16.823

6.  SLIM: A Short-Linked, Highly Redox-Stable Trityl Label for High-Sensitivity In-Cell EPR Distance Measurements.

Authors:  Nico Fleck; Caspar A Heubach; Tobias Hett; Florian R Haege; Pawel P Bawol; Helmut Baltruschat; Olav Schiemann
Journal:  Angew Chem Int Ed Engl       Date:  2020-04-30       Impact factor: 15.336

Review 7.  Expanding the Genetic Code for Site-Directed Spin-Labeling.

Authors:  Theresa Braun; Malte Drescher; Daniel Summerer
Journal:  Int J Mol Sci       Date:  2019-01-16       Impact factor: 5.923

8.  Protein Spin Labeling with a Photocaged Nitroxide Using Diels-Alder Chemistry.

Authors:  Anandi Kugele; Bjarne Silkenath; Jakob Langer; Valentin Wittmann; Malte Drescher
Journal:  Chembiochem       Date:  2019-08-14       Impact factor: 3.164

9.  gem-Diethyl Pyrroline Nitroxide Spin Labels: Synthesis, EPR Characterization, Rotamer Libraries and Biocompatibility.

Authors:  Stephanie Bleicken; Tufa E Assafa; Hui Zhang; Christina Elsner; Irina Ritsch; Maren Pink; Suchada Rajca; Gunnar Jeschke; Andrzej Rajca; Enrica Bordignon
Journal:  ChemistryOpen       Date:  2019-05-14       Impact factor: 2.911

10.  In-Cell Trityl-Trityl Distance Measurements on Proteins.

Authors:  Yin Yang; Bin-Bin Pan; Xiaoli Tan; Feng Yang; Yangping Liu; Xun-Cheng Su; Daniella Goldfarb
Journal:  J Phys Chem Lett       Date:  2020-01-28       Impact factor: 6.475

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