| Literature DB >> 34207026 |
Zuowei Ji1, Wenjing Guo1, Sugunadevi Sakkiah1, Jie Liu1, Tucker A Patterson1, Huixiao Hong1.
Abstract
Nanomaterials have drawn increasing attention due to their tunable and enhanced physicochemical and biological performance compared to their conventional bulk materials. Owing to the rapid expansion of the nano-industry, large amounts of data regarding the synthesis, physicochemical properties, and bioactivities of nanomaterials have been generated. These data are a great asset to the scientific community. However, the data are on diverse aspects of nanomaterials and in different sources and formats. To help utilize these data, various databases on specific information of nanomaterials such as physicochemical characterization, biomedicine, and nano-safety have been developed and made available online. Understanding the structure, function, and available data in these databases is needed for scientists to select appropriate databases and retrieve specific information for research on nanomaterials. However, to our knowledge, there is no study to systematically compare these databases to facilitate their utilization in the field of nanomaterials. Therefore, we reviewed and compared eight widely used databases of nanomaterials, aiming to provide the nanoscience community with valuable information about the specific content and function of these databases. We also discuss the pros and cons of these databases, thus enabling more efficient and convenient utilization.Entities:
Keywords: bioactivity; characterization; database; nanomaterial; physicochemical property
Year: 2021 PMID: 34207026 PMCID: PMC8234318 DOI: 10.3390/nano11061599
Source DB: PubMed Journal: Nanomaterials (Basel) ISSN: 2079-4991 Impact factor: 5.076
Figure 1Classification of nanomaterials based on composition and dimensionality.
Popular databases of nanomaterials (all the web links were accessed on 16 February 2021).
| Database | Website | Records | Remark |
|---|---|---|---|
| caNanoLab |
| 1383 | Nanotechnology in biomedicine |
| eNanoMapper |
| 2380 | Safety assessment of nanomaterials |
| NR |
| 2031 | Physicochemical properties |
| Nanowerk |
| 3785 | Commercially available nanomaterials |
| NBIK |
| 147 | Exposure effect in embryo zebrafish |
| NIL |
| 88 | Physicochemical characteristics |
| NKB |
| 598 | Nano-safety knowledge infrastructure |
| PubVINAS |
| 725 | An online nano-modeling tool |
Nanomaterials in the seven databases.
| Carbon | Lipid | Metal | Metal Oxide | Polymer | Semiconductor | Other | |
|---|---|---|---|---|---|---|---|
| caNanoLab | 78 | 97 | 143 | 272 | 528 | 73 | 192 |
| eNanoMapper | 120 | 42 | 723 | 150 | 513 | 226 | 606 |
| NR | 210 | 2 | 551 | 612 | 190 | 235 | 231 |
| NBIK | 4 | 0 | 47 | 22 | 33 | 34 | 7 |
| NIL | 17 | 0 | 15 | 13 | 0 | 25 | 18 |
| NKB | 31 | 0 | 164 | 96 | 0 | 50 | 257 |
| PubVINAS | 147 | 0 | 456 | 32 | 56 | 34 | 0 |
Figure 2Number of carbon-based nanomaterials (z-axis) of four shape types (depicted in different colors and marked at the y-axis) in the seven nanomaterial databases indicated on the x-axis.
Figure 3Number of nanomaterials (z-axis) with structure characterizations (indicated on the x-axis) in the seven databases (depicted in different colors and marked on the y-axis).
Figure 4Number of nanomaterials (z-axis) with physicochemical properties (indicated on the x-axis) in the seven databases (depicted in different colors and marked on the y-axis).
Figure 5Number of nanomaterials (z-axis) with biological activity data (indicated on the x-axis) in the six databases (depicted in different colors and marked on the y-axis).
Nanomaterials in the seven databases.
| Function | caNanoLab | eNanoMapper | NR | NBIK | NIL | NKB | PubVINAS |
|---|---|---|---|---|---|---|---|
| Browse | Yes | Yes | Yes | Yes | Yes | Yes | Yes |
| Search | Yes | Yes | Yes | Yes | Yes | Yes | |
| Filter | Yes | Yes | Yes | Yes | Yes | Yes | |
| Export | Yes | Yes | Yes | Yes | Yes | Yes | |
| Upload | Yes | Yes | Yes | Yes |