| Literature DB >> 34105069 |
Y Liao1, P Han1, Y Zhang2, B Ni3.
Abstract
Methylation of N6-adenosine (m6A) is the most prevalent internal RNA modification and is especially common among the messenger RNAs. These m6A modifications regulate splicing, translocation, stability and translation of RNA through dynamic and reversible interactions with m6A-binding proteins, namely the writers, erasers and readers. RNA methyltransferases catalyze the m6A modifications, while demethylases reverse this methylation. Deregulation of the m6A modification process has been implicated in human carcinogenesis, including melanoma-which carries one of the highest mutant rates. In this review, we provide an up-to-date summary of m6A regulation and its biological impacts on normal and cancer cells, with emphasis on the deregulation of m6A modification and m6A regulators in melanoma. In addition, we highlight the prospective potential of exploiting m6A modification in the treatment of melanoma and non-cancer diseases.Entities:
Keywords: Melanoma; RNA modification; Tumor; m6A
Mesh:
Substances:
Year: 2021 PMID: 34105069 PMCID: PMC8455380 DOI: 10.1007/s12094-021-02644-3
Source DB: PubMed Journal: Clin Transl Oncol ISSN: 1699-048X Impact factor: 3.405
Characteristics and functions of m6A enzymes in RNA metabolism
| Category | Gene | Characteristics and functions | References |
|---|---|---|---|
| Writers | METTL3 | Promotes formation of the methyltransferase complex, installs m6A on RNA, and catalyzes m6A modification | [ |
| METTL14 | Catalyzes the methylation reaction, mediates protein–protein interaction, and helps METTL3 recognize the special RNA substrate | [ | |
| METTL16 | A homologue of METTL3 Regulator of cellular SAM levels and methylator of U6 small nuclear RNA | [ | |
| WTAP | Contributes to the localization of METTL3-METTL14 heterodimer to the nuclear speckle Recruits target RNA for m6A modification Enhances the catalytic capacity of the writer | [ | |
| RBM15/15B | Binds the m6A complex and recruit it to special RNA site | [ | |
| VIRMA | Recruits the m6A complex to a special RNA site where it interacts with polyadenylation cleavage factors CPSF5 and CPSF6 | [ | |
| ZC3H13 | Bridges WTAP to the mRNA-binding factor to enhance m6A | [ | |
| Erasers | FTO | Reverses RNA modification and controls cellular homeostasis | [ |
| ALKBH5 | Maintains the balance of m6A levels within the transcriptome Contributions to in alkylated DNA repair | [ | |
| ALKBH3 | Performs its demethylation function on tRNA rather than mRNA or rRNA Generally considered to serve as a DNA repair enzyme | [ | |
| Readers | YTH family | First five characterized m6A readers | |
| YTHDC1 | Contributes to RNA splicing and export Plays a critical role in the pre-mRNA processing | [ | |
| YTHDC2 | Enhances the translation of target RNA but also reduces the abundance of target RNA | [ | |
| YTHDF1 | Enhances mRNA translation | [ | |
| YTHDF2 | Promotes mRNA degradation | [ | |
| YTHDF3 | Enhances translation and degradation by interacting with YTHDF1 and YTHDF2 | [ | |
| HNRNP family | Another group of RNA-binding proteins | ||
| HNRNPA2B1 | Mediates miRNA processing by recruiting a microprocessor complex upon binding to the m6A | [ | |
| HNRNPC/HNRNPG | Mediate selective splicing of m6A-modified transcripts, but do so through direct interaction whit m6A-dependent structural switches | [ | |
| eIF3 | Initiates the translation procedure by binding to the m6A site in the 5’-UTR of mRNA | [ | |
| IGF2BPs | Stabilizes the target gene | [ | |
| Prrc2a | Stabilizes mRNA expression by binding to a consensus GGACU motif in the coding sequence in an m6A-dependent manner | [ |
Fig. 1Schematic process and functions of m6A modification. m6A methylation is catalyzed by the writer complex, which includes METTL3, METTL14, WTAP, VIRMA, RBM15, and ZC3H13. The m6A modification is removed by the demethylases FTO or ALKBH5. Readers participate in multiple of steps RNA metabolism, including stability, decay, translation, splicing, and nuclear export
Fig. 2Potential roles of m6A modification in melanoma pathogenesis. The effect of m6A on melanoma cells is reflected in the regulation of cancer-related gene expression
Fig. 3Mechanistic illustrations of the regulatory and functional roles for FTO in melanoma. FTO can regulate cell-intrinsic expressions of PD-1, CXCR4, and SOX10 to promote the growth and anti-PD-1 response of melanoma