Literature DB >> 34061044

A generative adversarial network (GAN)-based technique for synthesizing realistic respiratory motion in the extended cardiac-torso (XCAT) phantoms.

Yushi Chang1,2, Zhuoran Jiang1, William Paul Segars2,3,4, Zeyu Zhang1,2, Kyle Lafata1, Jing Cai5, Fang-Fang Yin1,2, Lei Ren6.   

Abstract

Objective. Synthesize realistic and controllable respiratory motions in the extended cardiac-torso (XCAT) phantoms by developing a generative adversarial network (GAN)-based deep learning technique.Methods. A motion generation model was developed using bicycle-GAN with a novel 4D generator. Input with the end-of-inhale (EOI) phase images and a Gaussian perturbation, the model generates inter-phase deformable-vector-fields (DVFs), which were composed and applied to the input to generate 4D images. The model was trained and validated using 71 4D-CT images from lung cancer patients and then applied to the XCAT EOI images to generate 4D-XCAT with realistic respiratory motions. A separate respiratory motion amplitude control model was built using decision tree regression to predict the input perturbation needed for a specific motion amplitude, and this model was developed using 300 4D-XCAT generated from 6 XCAT phantom sizes with 50 different perturbations for each size. In both patient and phantom studies, Dice coefficients for lungs and lung volume variation during respiration were compared between the simulated images and reference images. The generated DVF was evaluated by deformation energy. DVFs and ventilation maps of the simulated 4D-CT were compared with the reference 4D-CTs using cross correlation and Spearman's correlation. Comparison of DVFs and ventilation maps among the original 4D-XCAT, the generated 4D-XCAT, and reference patient 4D-CTs were made to show the improvement of motion realism by the model. The amplitude control error was calculated.Results. Comparing the simulated and reference 4D-CTs, the maximum deviation of lung volume during respiration was 5.8%, and the Dice coefficient reached at least 0.95 for lungs. The generated DVFs presented comparable deformation energy levels. The cross correlation of DVFs achieved 0.89 ± 0.10/0.86 ± 0.12/0.95 ± 0.04 along thex/y/zdirection in the testing group. The cross correlation of ventilation maps derived achieved 0.80 ± 0.05/0.67 ± 0.09/0.68 ± 0.13, and the Spearman's correlation achieved 0.70 ± 0.05/0, 60 ± 0.09/0.53 ± 0.01, respectively, in the training/validation/testing groups. The generated 4D-XCAT phantoms presented similar deformation energy as patient data while maintained the lung volumes of the original XCAT phantom (Dice = 0.95, maximum lung volume variation = 4%). The motion amplitude control models controlled the motion amplitude control error to be less than 0.5 mm.Conclusions. The results demonstrated the feasibility of synthesizing realistic controllable respiratory motion in the XCAT phantom using the proposed method. This crucial development enhances the value of XCAT phantoms for various 4D imaging and therapy studies.
© 2021 Institute of Physics and Engineering in Medicine.

Entities:  

Keywords:  XCAT phantom; deformation vector field; generative adversarial network; virtual trial

Mesh:

Year:  2021        PMID: 34061044      PMCID: PMC9139421          DOI: 10.1088/1361-6560/ac01b4

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   4.174


  19 in total

1.  Creating an anthropomorphic digital MR phantom--an extensible tool for comparing and evaluating quantitative imaging algorithms.

Authors:  Ryan J Bosca; Edward F Jackson
Journal:  Phys Med Biol       Date:  2016-01-07       Impact factor: 3.609

2.  Registration-based estimates of local lung tissue expansion compared to xenon CT measures of specific ventilation.

Authors:  Joseph M Reinhardt; Kai Ding; Kunlin Cao; Gary E Christensen; Eric A Hoffman; Shalmali V Bodas
Journal:  Med Image Anal       Date:  2008-04-12       Impact factor: 8.545

3.  Effect of respiratory motion on internal radiation dosimetry.

Authors:  Tianwu Xie; Habib Zaidi
Journal:  Med Phys       Date:  2014-11       Impact factor: 4.071

4.  A limited-angle intrafraction verification (LIVE) system for radiation therapy.

Authors:  Lei Ren; You Zhang; Fang-Fang Yin
Journal:  Med Phys       Date:  2014-02       Impact factor: 4.071

5.  Quantifying the reproducibility of lung ventilation images between 4-Dimensional Cone Beam CT and 4-Dimensional CT.

Authors:  Henry C Woodruff; Chun-Chien Shieh; Fiona Hegi-Johnson; Paul J Keall; John Kipritidis
Journal:  Med Phys       Date:  2017-04-17       Impact factor: 4.071

6.  Reproducibility of four-dimensional computed tomography-based lung ventilation imaging.

Authors:  Tokihiro Yamamoto; Sven Kabus; Jens von Berg; Cristian Lorenz; Melody P Chung; Julian C Hong; Billy W Loo; Paul J Keall
Journal:  Acad Radiol       Date:  2012-09-10       Impact factor: 3.173

7.  Image acquisition optimization of a limited-angle intrafraction verification (LIVE) system for lung radiotherapy.

Authors:  Yawei Zhang; Xinchen Deng; Fang-Fang Yin; Lei Ren
Journal:  Med Phys       Date:  2017-11-30       Impact factor: 4.071

8.  4D XCAT phantom for multimodality imaging research.

Authors:  W P Segars; G Sturgeon; S Mendonca; Jason Grimes; B M W Tsui
Journal:  Med Phys       Date:  2010-09       Impact factor: 4.071

9.  SPARE: Sparse-view reconstruction challenge for 4D cone-beam CT from a 1-min scan.

Authors:  Chun-Chien Shieh; Yesenia Gonzalez; Bin Li; Xun Jia; Simon Rit; Cyril Mory; Matthew Riblett; Geoffrey Hugo; Yawei Zhang; Zhuoran Jiang; Xiaoning Liu; Lei Ren; Paul Keall
Journal:  Med Phys       Date:  2019-07-19       Impact factor: 4.071

10.  MRI-based treatment planning for liver stereotactic body radiotherapy: validation of a deep learning-based synthetic CT generation method.

Authors:  Yingzi Liu; Yang Lei; Tonghe Wang; Oluwatosin Kayode; Sibo Tian; Tian Liu; Pretesh Patel; Walter J Curran; Lei Ren; Xiaofeng Yang
Journal:  Br J Radiol       Date:  2019-06-20       Impact factor: 3.039

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