Literature DB >> 33735291

On the influence of cell shape on dynamic reaction-diffusion polarization patterns.

K Eroumé1, A Vasilevich2, S Vermeulen1,2, J de Boer2, A Carlier1.   

Abstract

The distribution of signaling molecules following mechanical or chemical stimulation of a cell defines cell polarization, with regions of high active Cdc42 at the front and low active Cdc42 at the rear. As reaction-diffusion phenomena between signaling molecules, such as Rho GTPases, define the gradient dynamics, we hypothesize that the cell shape influences the maintenance of the "front-to-back" cell polarization patterns. We investigated the influence of cell shape on the Cdc42 patterns using an established computational polarization model. Our simulation results showed that not only cell shape but also Cdc42 and Rho-related (in)activation parameter values affected the distribution of active Cdc42. Despite an initial Cdc42 gradient, the in silico results showed that the maximal Cdc42 concentration shifts in the opposite direction, a phenomenon we propose to call "reverse polarization". Additional in silico analyses indicated that "reverse polarization" only occurred in a particular parameter value space that resulted in a balance between inactivation and activation of Rho GTPases. Future work should focus on a mathematical description of the underpinnings of reverse polarization, in combination with experimental validation using, for example, dedicated FRET-probes to spatiotemporally track Rho GTPase patterns in migrating cells. In summary, the findings of this study enhance our understanding of the role of cell shape in intracellular signaling.

Entities:  

Year:  2021        PMID: 33735291      PMCID: PMC7971540          DOI: 10.1371/journal.pone.0248293

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  42 in total

1.  Wave-pinning and cell polarity from a bistable reaction-diffusion system.

Authors:  Yoichiro Mori; Alexandra Jilkine; Leah Edelstein-Keshet
Journal:  Biophys J       Date:  2008-01-22       Impact factor: 4.033

Review 2.  From simple to detailed models for cell polarization.

Authors:  Leah Edelstein-Keshet; William R Holmes; Mark Zajac; Meghan Dutot
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-09-23       Impact factor: 6.237

3.  Modeling self-organized spatio-temporal patterns of PIP₃ and PTEN during spontaneous cell polarization.

Authors:  Fabian Knoch; Marco Tarantola; Eberhard Bodenschatz; Wouter-Jan Rappel
Journal:  Phys Biol       Date:  2014-07-15       Impact factor: 2.583

Review 4.  Roles of Rho-family GTPases in cell polarisation and directional migration.

Authors:  Masaki Fukata; Masato Nakagawa; Kozo Kaibuchi
Journal:  Curr Opin Cell Biol       Date:  2003-10       Impact factor: 8.382

5.  Effects of 3D geometries on cellular gradient sensing and polarization.

Authors:  Fabian Spill; Vivi Andasari; Michael Mak; Roger D Kamm; Muhammad H Zaman
Journal:  Phys Biol       Date:  2016-06-25       Impact factor: 2.583

6.  Computational model explains high activity and rapid cycling of Rho GTPases within protein complexes.

Authors:  Andrew B Goryachev; Alexandra V Pokhilko
Journal:  PLoS Comput Biol       Date:  2006-10-09       Impact factor: 4.475

Review 7.  Many roads to symmetry breaking: molecular mechanisms and theoretical models of yeast cell polarity.

Authors:  Andrew B Goryachev; Marcin Leda
Journal:  Mol Biol Cell       Date:  2017-02-01       Impact factor: 4.138

8.  On system-spanning demixing properties of cell polarization.

Authors:  Fabian Bergmann; Walter Zimmermann
Journal:  PLoS One       Date:  2019-06-21       Impact factor: 3.240

9.  Analysis of a minimal Rho-GTPase circuit regulating cell shape.

Authors:  William R Holmes; Leah Edelstein-Keshet
Journal:  Phys Biol       Date:  2016-07-19       Impact factor: 2.583

10.  Plasticity of cell migration resulting from mechanochemical coupling.

Authors:  Yuansheng Cao; Elisabeth Ghabache; Wouter-Jan Rappel
Journal:  Elife       Date:  2019-10-18       Impact factor: 8.140

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  1 in total

1.  Sensing the shape of a cell with reaction diffusion and energy minimization.

Authors:  Amit R Singh; Travis Leadbetter; Brian A Camley
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-29       Impact factor: 12.779

  1 in total

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