Literature DB >> 25024302

Modeling self-organized spatio-temporal patterns of PIP₃ and PTEN during spontaneous cell polarization.

Fabian Knoch1, Marco Tarantola, Eberhard Bodenschatz, Wouter-Jan Rappel.   

Abstract

During spontaneous cell polarization of Dictyostelium discoideum cells, phosphatidylinositol (3,4,5)-triphoshpate (PIP3) and PTEN (phosphatase tensin homolog) have been identified as key signaling molecules which govern the process of polarization in a self-organized manner. Recent experiments have quantified the spatio-temporal dynamics of these signaling components. Surprisingly, it was found that membrane-bound PTEN can be either in a high or low state, that PIP3 waves were initiated in areas lacking PTEN through an excitable mechanism, and that PIP3 was degraded even though the PTEN concentration remained low. Here we develop a reaction-diffusion model that aims to explain these experimental findings. Our model contains bistable dynamics for PTEN, excitable dynamics for PIP3, and postulates the existence of two species of PTEN with different dephosphorylation rates. We show that our model is able to produce results that are in good qualitative agreement with the experiments, suggesting that our reaction-diffusion model underlies the self-organized spatio-temporal patterns observed in experiments.

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Year:  2014        PMID: 25024302      PMCID: PMC4526168          DOI: 10.1088/1478-3975/11/4/046002

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  45 in total

1.  Eukaryotic cell locomotion depends on the propagation of self-organized reaction-diffusion waves and oscillations of actin filament assembly.

Authors:  Michael G Vicker
Journal:  Exp Cell Res       Date:  2002-04-15       Impact factor: 3.905

2.  Novel mechanism of PTEN regulation by its phosphatidylinositol 4,5-bisphosphate binding motif is critical for chemotaxis.

Authors:  Miho Iijima; Yi Elaine Huang; Hongbo R Luo; Francisca Vazquez; Peter N Devreotes
Journal:  J Biol Chem       Date:  2004-02-05       Impact factor: 5.157

3.  Diverse sensitivity thresholds in dynamic signaling responses by social amoebae.

Authors:  C Joanne Wang; Adriel Bergmann; Benjamin Lin; Kyuri Kim; Andre Levchenko
Journal:  Sci Signal       Date:  2012-02-28       Impact factor: 8.192

4.  Intracellular encoding of spatiotemporal guidance cues in a self-organizing signaling system for chemotaxis in Dictyostelium cells.

Authors:  Tatsuo Shibata; Masatoshi Nishikawa; Satomi Matsuoka; Masahiro Ueda
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

5.  Self-organizing actin waves as planar phagocytic cup structures.

Authors:  Günther Gerisch; Mary Ecke; Britta Schroth-Diez; Silke Gerwig; Ulrike Engel; Lucinda Maddera; Margaret Clarke
Journal:  Cell Adh Migr       Date:  2009-10-01       Impact factor: 3.405

6.  Reversible membrane pearling in live cells upon destruction of the actin cortex.

Authors:  Doris Heinrich; Mary Ecke; Marion Jasnin; Ulrike Engel; Günther Gerisch
Journal:  Biophys J       Date:  2014-03-04       Impact factor: 4.033

7.  Modeling the self-organized phosphatidylinositol lipid signaling system in chemotactic cells using quantitative image analysis.

Authors:  Tatsuo Shibata; Masatoshi Nishikawa; Satomi Matsuoka; Masahiro Ueda
Journal:  J Cell Sci       Date:  2012-08-16       Impact factor: 5.285

8.  Self-organization of the phosphatidylinositol lipids signaling system for random cell migration.

Authors:  Yoshiyuki Arai; Tatsuo Shibata; Satomi Matsuoka; Masayuki J Sato; Toshio Yanagida; Masahiro Ueda
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-18       Impact factor: 11.205

9.  An actin-based wave generator organizes cell motility.

Authors:  Orion D Weiner; William A Marganski; Lani F Wu; Steven J Altschuler; Marc W Kirschner
Journal:  PLoS Biol       Date:  2007-09       Impact factor: 8.029

10.  An excitable signal integrator couples to an idling cytoskeletal oscillator to drive cell migration.

Authors:  Chuan-Hsiang Huang; Ming Tang; Changji Shi; Pablo A Iglesias; Peter N Devreotes
Journal:  Nat Cell Biol       Date:  2013-10-20       Impact factor: 28.824

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  9 in total

1.  Oscillatory Switches of Dorso-Ventral Polarity in Cells Confined between Two Surfaces.

Authors:  Jonne Helenius; Mary Ecke; Daniel J Müller; Günther Gerisch
Journal:  Biophys J       Date:  2018-07-03       Impact factor: 4.033

2.  Effects of 3D geometries on cellular gradient sensing and polarization.

Authors:  Fabian Spill; Vivi Andasari; Michael Mak; Roger D Kamm; Muhammad H Zaman
Journal:  Phys Biol       Date:  2016-06-25       Impact factor: 2.583

3.  Scanning x-ray nanodiffraction on Dictyostelium discoideum.

Authors:  Marius Priebe; Marten Bernhardt; Christoph Blum; Marco Tarantola; Eberhard Bodenschatz; Tim Salditt
Journal:  Biophys J       Date:  2014-12-02       Impact factor: 4.033

4.  Modeling random crawling, membrane deformation and intracellular polarity of motile amoeboid cells.

Authors:  Sergio Alonso; Maike Stange; Carsten Beta
Journal:  PLoS One       Date:  2018-08-23       Impact factor: 3.240

5.  Excitable dynamics of Ras triggers spontaneous symmetry breaking of PIP3 signaling in motile cells.

Authors:  Seiya Fukushima; Satomi Matsuoka; Masahiro Ueda
Journal:  J Cell Sci       Date:  2019-03-04       Impact factor: 5.285

6.  On the influence of cell shape on dynamic reaction-diffusion polarization patterns.

Authors:  K Eroumé; A Vasilevich; S Vermeulen; J de Boer; A Carlier
Journal:  PLoS One       Date:  2021-03-18       Impact factor: 3.240

7.  Mutual inhibition between PTEN and PIP3 generates bistability for polarity in motile cells.

Authors:  Satomi Matsuoka; Masahiro Ueda
Journal:  Nat Commun       Date:  2018-10-26       Impact factor: 14.919

8.  Plasticity of cell migration resulting from mechanochemical coupling.

Authors:  Yuansheng Cao; Elisabeth Ghabache; Wouter-Jan Rappel
Journal:  Elife       Date:  2019-10-18       Impact factor: 8.140

9.  Actin Waves and Dynamic Patterning of the Plasma Membrane.

Authors:  Guenther Gerisch; Jana Prassler; Nelson Butterfield; Mary Ecke
Journal:  Yale J Biol Med       Date:  2019-09-20
  9 in total

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