Literature DB >> 33707548

Characterization of an active LINE-1 in the naked mole-rat genome.

Shunichi Yamaguchi1, Shizuka Nohara2, Yuki Nishikawa1, Yusuke Suzuki3, Yoshimi Kawamura3, Kyoko Miura3,4, Keizo Tomonaga2,5,6, Keiji Ueda1, Tomoyuki Honda7,8,9.   

Abstract

Naked mole-rats (NMRs, Heterocephalus glaber) are the longest-living rodent species. A reason for their long lifespan is pronounced cancer resistance. Therefore, researchers believe that NMRs have unknown secrets of cancer resistance and seek to find them. Here, to reveal the secrets, we noticed a retrotransposon, long interspersed nuclear element 1 (L1). L1s can amplify themselves and are considered endogenous oncogenic mutagens. Since the NMR genome contains fewer L1-derived sequences than other mammalian genomes, we reasoned that the retrotransposition activity of L1s in the NMR genome is lower than those in other mammalian genomes. In this study, we successfully cloned an intact L1 from the NMR genome and named it NMR-L1. An L1 retrotransposition assay using the NMR-L1 reporter revealed that NMR-L1 was active retrotransposon, but its activity was lower than that of human and mouse L1s. Despite lower retrotrasposition activity, NMR-L1 was still capable of inducing cell senescence, a tumor-protective system. NMR-L1 required the 3' untranslated region (UTR) for retrotransposition, suggesting that NMR-L1 is a stringent-type of L1. We also confirmed the 5' UTR promoter activity of NMR-L1. Finally, we identified the G-quadruplex structure of the 3' UTR, which modulated the retrotransposition activity of NMR-L1. Taken together, the data indicate that NMR-L1 retrotranspose less efficiently, which may contribute to the cancer resistance of NMRs.

Entities:  

Mesh:

Substances:

Year:  2021        PMID: 33707548      PMCID: PMC7952902          DOI: 10.1038/s41598-021-84962-8

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  33 in total

1.  Latent infection with Kaposi's sarcoma-associated herpesvirus enhances retrotransposition of long interspersed element-1.

Authors:  Ryota Nakayama; Yumiko Ueno; Keiji Ueda; Tomoyuki Honda
Journal:  Oncogene       Date:  2019-02-15       Impact factor: 9.867

2.  G-quadruplex structures within the 3' UTR of LINE-1 elements stimulate retrotransposition.

Authors:  Aleksandr B Sahakyan; Pierre Murat; Clemens Mayer; Shankar Balasubramanian
Journal:  Nat Struct Mol Biol       Date:  2017-01-30       Impact factor: 15.369

Review 3.  Dynamic interactions between transposable elements and their hosts.

Authors:  Henry L Levin; John V Moran
Journal:  Nat Rev Genet       Date:  2011-08-18       Impact factor: 53.242

Review 4.  Biology of mammalian L1 retrotransposons.

Authors:  E M Ostertag; H H Kazazian
Journal:  Annu Rev Genet       Date:  2001       Impact factor: 16.830

Review 5.  DNA secondary structures: stability and function of G-quadruplex structures.

Authors:  Matthew L Bochman; Katrin Paeschke; Virginia A Zakian
Journal:  Nat Rev Genet       Date:  2012-10-03       Impact factor: 53.242

Review 6.  Negligible senescence in the longest living rodent, the naked mole-rat: insights from a successfully aging species.

Authors:  Rochelle Buffenstein
Journal:  J Comp Physiol B       Date:  2008-01-08       Impact factor: 2.200

7.  Initial Case Reports of Cancer in Naked Mole-rats (Heterocephalus glaber).

Authors:  M A Delaney; J M Ward; T F Walsh; S K Chinnadurai; K Kerns; M J Kinsel; P M Treuting
Journal:  Vet Pathol       Date:  2016-02-04       Impact factor: 2.221

Review 8.  Human transposon tectonics.

Authors:  Kathleen H Burns; Jef D Boeke
Journal:  Cell       Date:  2012-05-11       Impact factor: 41.582

9.  Tumour resistance in induced pluripotent stem cells derived from naked mole-rats.

Authors:  Shingo Miyawaki; Yoshimi Kawamura; Yuki Oiwa; Atsushi Shimizu; Tsuyoshi Hachiya; Hidemasa Bono; Ikuko Koya; Yohei Okada; Tokuhiro Kimura; Yoshihiro Tsuchiya; Sadafumi Suzuki; Nobuyuki Onishi; Naoko Kuzumaki; Yumi Matsuzaki; Minoru Narita; Eiji Ikeda; Kazuo Okanoya; Ken-Ichiro Seino; Hideyuki Saya; Hideyuki Okano; Kyoko Miura
Journal:  Nat Commun       Date:  2016-05-10       Impact factor: 14.919

10.  LINE-1 retrotransposition activity in human genomes.

Authors:  Christine R Beck; Pamela Collier; Catriona Macfarlane; Maika Malig; Jeffrey M Kidd; Evan E Eichler; Richard M Badge; John V Moran
Journal:  Cell       Date:  2010-06-25       Impact factor: 41.582

View more
  1 in total

1.  The fifth Japanese meeting on biological function and evolution through interactions between hosts and transposable elements.

Authors:  Kenji Ichiyanagi; Kuniaki Saito
Journal:  Mob DNA       Date:  2022-01-13
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.