Literature DB >> 33597632

Machine learning methodology for high throughput personalized neutron dose reconstruction in mixed neutron + photon exposures.

Igor Shuryak1, Helen C Turner2, Monica Pujol-Canadell2, Jay R Perrier2, Guy Garty2, David J Brenner2.   

Abstract

We implemented machine learning in the radiation biodosimetry field to quantitatively reconstruct neutron doses in mixed neutron + photon exposures, which are expected in improvised nuclear device detonations. Such individualized reconstructions are crucial for triage and treatment because neutrons are more biologically damaging than photons. We used a high-throughput micronucleus assay with automated scanning/imaging on lymphocytes from human blood ex-vivo irradiated with 44 different combinations of 0-4 Gy neutrons and 0-15 Gy photons (542 blood samples), which include reanalysis of past experiments. We developed several metrics that describe micronuclei/cell probability distributions in binucleated cells, and used them as predictors in random forest (RF) and XGboost machine learning analyses to reconstruct the neutron dose in each sample. The probability of "overfitting" was minimized by training both algorithms with repeated cross-validation on a randomly-selected subset of the data, and measuring performance on the rest. RF achieved the best performance. Mean R2 for actual vs. reconstructed neutron doses over 300 random training/testing splits was 0.869 (range 0.761 to 0.919) and root mean squared error was 0.239 (0.195 to 0.351) Gy. These results demonstrate the promising potential of machine learning to reconstruct the neutron dose component in clinically-relevant complex radiation exposure scenarios.

Entities:  

Mesh:

Year:  2021        PMID: 33597632      PMCID: PMC7889851          DOI: 10.1038/s41598-021-83575-5

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  29 in total

1.  Broad Energy Range Neutron Spectroscopy using a Liquid Scintillator and a Proportional Counter: Application to a Neutron Spectrum Similar to that from an Improvised Nuclear Device.

Authors:  Yanping Xu; Gerhard Randers-Pehrson; Stephen A Marino; Guy Garty; Andrew Harken; David J Brenner
Journal:  Nucl Instrum Methods Phys Res A       Date:  2015-09-11       Impact factor: 1.455

2.  Analysis of chromosome aberrations in human peripheral lymphocytes induced by in vitro alpha-particle irradiation.

Authors:  E Schmid; L Hieber; U Heinzmann; H Roos; A M Kellerer
Journal:  Radiat Environ Biophys       Date:  1996-08       Impact factor: 1.925

3.  The RENEB operational basis: complement of established biodosimetric assays.

Authors:  Andrzej Wojcik; Ursula Oestreicher; Lleonard Barrios; Anne Vral; Georgia Terzoudi; Elizabeth Ainsbury; Kai Rothkamm; Francois Trompier; Ulrike Kulka
Journal:  Int J Radiat Biol       Date:  2016-10-25       Impact factor: 2.694

4.  Mice and the A-Bomb: Irradiation Systems for Realistic Exposure Scenarios.

Authors:  Guy Garty; Yanping Xu; Carl Elliston; Stephen A Marino; Gerhard Randers-Pehrson; David J Brenner
Journal:  Radiat Res       Date:  2017-02-17       Impact factor: 2.841

5.  Radiation induced chromosome aberrations and the Poisson distribution.

Authors:  A A Edwards; D C Lloyd; R J Purrott
Journal:  Radiat Environ Biophys       Date:  1979-04-30       Impact factor: 1.925

6.  Automated Triage Radiation Biodosimetry: Integrating Imaging Flow Cytometry with High-Throughput Robotics to Perform the Cytokinesis-Block Micronucleus Assay.

Authors:  Qi Wang; Matthew A Rodrigues; Mikhail Repin; Sergey Pampou; Lindsay A Beaton-Green; Jay Perrier; Guy Garty; David J Brenner; Helen C Turner; Ruth C Wilkins
Journal:  Radiat Res       Date:  2019-02-19       Impact factor: 2.841

7.  UNITED STATES DEPARTMENT OF HEALTH AND HUMAN SERVICES BIODOSIMETRY AND RADIOLOGICAL/NUCLEAR MEDICAL COUNTERMEASURE PROGRAMS.

Authors:  Mary J Homer; Robert Raulli; Andrea L DiCarlo-Cohen; John Esker; Chad Hrdina; Bert W Maidment; Brian Moyer; Carmen Rios; Francesca Macchiarini; Pataje G Prasanna; Lynne Wathen
Journal:  Radiat Prot Dosimetry       Date:  2016-09-02       Impact factor: 0.972

8.  Novel neutron sources at the Radiological Research Accelerator Facility.

Authors:  Yanping Xu; Guy Garty; Stephen A Marino; Thomas N Massey; Gerhard Randers-Pehrson; Gary W Johnson; David J Brenner
Journal:  J Instrum       Date:  2012-03-16       Impact factor: 1.415

9.  Biodosimetry: Medicine, Science, and Systems to Support the Medical Decision-Maker Following a Large Scale Nuclear or Radiation Incident.

Authors:  C Norman Coleman; John F Koerner
Journal:  Radiat Prot Dosimetry       Date:  2016-07-29       Impact factor: 0.954

Review 10.  Application of Machine Learning in Microbiology.

Authors:  Kaiyang Qu; Fei Guo; Xiangrong Liu; Yuan Lin; Quan Zou
Journal:  Front Microbiol       Date:  2019-04-18       Impact factor: 5.640

View more
  2 in total

1.  Cytogenetic Damage of Human Lymphocytes in Humanized Mice Exposed to Neutrons and X Rays 24 h After Exposure.

Authors:  Qi Wang; Younghyun Lee; Monica Pujol-Canadell; Jay R Perrier; Lubomir Smilenov; Andrew Harken; Guy Garty; David J Brenner; Brian Ponnaiya; Helen C Turner
Journal:  Cytogenet Genome Res       Date:  2021-09-06       Impact factor: 1.941

2.  A MATLAB-based program for three-dimensional quantitative analysis of micronuclei reveals that neuroinflammation induces micronuclei formation in the brain.

Authors:  Kaito Akiyama; Rio Tsuchiya; Sarasa Yano; Hikari Kubotani; Tomoki Chiba; Takeshi Nagata; Fuminori Tsuruta
Journal:  Sci Rep       Date:  2021-09-15       Impact factor: 4.379

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.