Literature DB >> 30779694

Automated Triage Radiation Biodosimetry: Integrating Imaging Flow Cytometry with High-Throughput Robotics to Perform the Cytokinesis-Block Micronucleus Assay.

Qi Wang1, Matthew A Rodrigues2, Mikhail Repin1, Sergey Pampou3, Lindsay A Beaton-Green4, Jay Perrier1, Guy Garty1, David J Brenner1, Helen C Turner1, Ruth C Wilkins4.   

Abstract

The cytokinesis-block micronucleus (CBMN) assay has become a fully-validated and standardized method for radiation biodosimetry. The assay is typically performed using microscopy, which is labor intensive, time consuming and impractical after a large-scale radiological/nuclear event. Imaging flow cytometry (IFC), which combines the statistical power of traditional flow cytometry with the sensitivity and specificity of microscopy, has been recently used to perform the CBMN assay. Since this technology is capable of automated sample acquisition and multi-file analysis, we have integrated IFC into our Rapid Automated Biodosimetry Technology (RABiT-II). Assay development and optimization studies were designed to increase the yield of binucleated cells (BNCs), and improve data acquisition and analysis templates to increase the speed and accuracy of image analysis. Human peripheral blood samples were exposed ex vivo with up to 4 Gy of c rays at a dose rate of 0.73 Gy/min. After irradiation, samples were transferred to microtubes (total volume of 1 ml including blood and media) and organized into a standard 8 × 12 plate format. Sample processing methods were modified by increasing the blood-to-media ratio, adding hypotonic solution prior to cell fixation and optimizing nuclear DRAQ5 staining, leading to an increase of 81% in BNC yield. Modification of the imaging processing algorithms within IFC software also improved BNC and MN identification, and reduced the average time of image analysis by 78%. Finally, 50 ll of irradiated whole blood was cultured with 200 ll of media in 96-well plates. All sample processing steps were performed automatically using the RABiT-II cell: :explorer robotic system adopting the optimized IFC-CBMN assay protocol. The results presented here detail a novel, high-throughput RABiT-IFC CBMN assay that possesses the potential to increase capacity for triage biodosimetry during a large-scale radiological/nuclear event.

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Year:  2019        PMID: 30779694      PMCID: PMC6483078          DOI: 10.1667/RR15243.1

Source DB:  PubMed          Journal:  Radiat Res        ISSN: 0033-7587            Impact factor:   2.841


  29 in total

Review 1.  The potential for complete automated scoring of the cytokinesis block micronucleus cytome assay using imaging flow cytometry.

Authors:  Matthew A Rodrigues; Lindsay A Beaton-Green; Ruth C Wilkins; Michael F Fenech
Journal:  Mutat Res Genet Toxicol Environ Mutagen       Date:  2018-05-06       Impact factor: 2.873

2.  Fast image analysis for the micronucleus assay in a fully automated high-throughput biodosimetry system.

Authors:  Oleksandra V Lyulko; Guy Garty; Gerhard Randers-Pehrson; Helen C Turner; Barbara Szolc; David J Brenner
Journal:  Radiat Res       Date:  2014-02-06       Impact factor: 2.841

3.  Next generation platforms for high-throughput biodosimetry.

Authors:  Mikhail Repin; Helen C Turner; Guy Garty; David J Brenner
Journal:  Radiat Prot Dosimetry       Date:  2014-05-17       Impact factor: 0.972

4.  Principles of Amnis Imaging Flow Cytometry.

Authors:  David A Basiji
Journal:  Methods Mol Biol       Date:  2016

5.  THE DECADE OF THE RABiT (2005-15).

Authors:  G Garty; H C Turner; A Salerno; A Bertucci; J Zhang; Y Chen; A Dutta; P Sharma; D Bian; M Taveras; H Wang; A Bhatla; A Balajee; A W Bigelow; M Repin; O V Lyulko; N Simaan; Y L Yao; D J Brenner
Journal:  Radiat Prot Dosimetry       Date:  2016-07-13       Impact factor: 0.972

6.  The RABiT: a rapid automated biodosimetry tool for radiological triage. II. Technological developments.

Authors:  Guy Garty; Youhua Chen; Helen C Turner; Jian Zhang; Oleksandra V Lyulko; Antonella Bertucci; Yanping Xu; Hongliang Wang; Nabil Simaan; Gerhard Randers-Pehrson; Y Lawrence Yao; David J Brenner
Journal:  Int J Radiat Biol       Date:  2011-05-11       Impact factor: 2.694

Review 7.  The in vitro micronucleus technique.

Authors:  M Fenech
Journal:  Mutat Res       Date:  2000-11-20       Impact factor: 2.433

8.  Adapting the γ-H2AX assay for automated processing in human lymphocytes. 1. Technological aspects.

Authors:  Helen C Turner; David J Brenner; Youhua Chen; Antonella Bertucci; Jian Zhang; Hongliang Wang; Oleksandra V Lyulko; Yanping Xu; Igor Shuryak; Julia Schaefer; Nabil Simaan; Gerhard Randers-Pehrson; Y Lawrence Yao; Sally A Amundson; Guy Garty
Journal:  Radiat Res       Date:  2010-12-28       Impact factor: 2.841

9.  The RABIT: a rapid automated biodosimetry tool for radiological triage.

Authors:  Guy Garty; Youhua Chen; Alessio Salerno; Helen Turner; Jian Zhang; Oleksandra Lyulko; Antonella Bertucci; Yanping Xu; Hongliang Wang; Nabil Simaan; Gerhard Randers-Pehrson; Y Lawrence Yao; Sally A Amundson; David J Brenner
Journal:  Health Phys       Date:  2010-02       Impact factor: 1.316

Review 10.  HUMN project initiative and review of validation, quality control and prospects for further development of automated micronucleus assays using image cytometry systems.

Authors:  Michael Fenech; Micheline Kirsch-Volders; Andrea Rossnerova; Radim Sram; Horst Romm; Claudia Bolognesi; Adarsh Ramakumar; Francoise Soussaline; Christian Schunck; Azeddine Elhajouji; Wagida Anwar; Stefano Bonassi
Journal:  Int J Hyg Environ Health       Date:  2013-03-16       Impact factor: 5.840

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  12 in total

1.  DNA damage response in peripheral mouse blood leukocytes in vivo after variable, low-dose rate exposure.

Authors:  Qi Wang; Monica Pujol-Canadell; Maria Taveras; Guy Garty; Jay Perrier; Carlos Bueno-Beti; Igor Shuryak; David J Brenner; Helen C Turner
Journal:  Radiat Environ Biophys       Date:  2020-01-02       Impact factor: 1.925

2.  Dose and Dose-Rate Effects in a Mouse Model of Internal Exposure from 137Cs. Part 2: Integration of Gamma-H2AX and Gene Expression Biomarkers for Retrospective Radiation Biodosimetry.

Authors:  Igor Shuryak; Shanaz A Ghandhi; Helen C Turner; Waylon Weber; Dunstana Melo; Sally A Amundson; David J Brenner
Journal:  Radiat Res       Date:  2020-11-01       Impact factor: 2.841

3.  The in vitro micronucleus assay using imaging flow cytometry and deep learning.

Authors:  Matthew A Rodrigues; Christine E Probst; Artiom Zayats; Bryan Davidson; Michael Riedel; Yang Li; Vidya Venkatachalam
Journal:  NPJ Syst Biol Appl       Date:  2021-05-18

4.  Development of the FAST-DOSE assay system for high-throughput biodosimetry and radiation triage.

Authors:  Qi Wang; Younghyun Lee; Igor Shuryak; Monica Pujol Canadell; Maria Taveras; Jay R Perrier; Bezalel A Bacon; Matthew A Rodrigues; Richard Kowalski; Christopher Capaccio; David J Brenner; Helen C Turner
Journal:  Sci Rep       Date:  2020-07-29       Impact factor: 4.379

5.  Development of a high-throughput γ-H2AX assay based on imaging flow cytometry.

Authors:  Younghyun Lee; Qi Wang; Igor Shuryak; David J Brenner; Helen C Turner
Journal:  Radiat Oncol       Date:  2019-08-22       Impact factor: 3.481

6.  Machine learning methodology for high throughput personalized neutron dose reconstruction in mixed neutron + photon exposures.

Authors:  Igor Shuryak; Helen C Turner; Monica Pujol-Canadell; Jay R Perrier; Guy Garty; David J Brenner
Journal:  Sci Rep       Date:  2021-02-17       Impact factor: 4.379

Review 7.  Scientific and Logistical Considerations When Screening for Radiation Risks by Using Biodosimetry Based on Biological Effects of Radiation Rather than Dose: The Need for Prior Measurements of Homogeneity and Distribution of Dose.

Authors:  Harold M Swartz; Ann Barry Flood; Vijay K Singh; Steven G Swarts
Journal:  Health Phys       Date:  2020-07       Impact factor: 2.922

8.  The use of a centrifuge-free RABiT-II system for high-throughput micronucleus analysis.

Authors:  Mikhail Repin; Sergey Pampou; David J Brenner; Guy Garty
Journal:  J Radiat Res       Date:  2020-01-23       Impact factor: 2.724

9.  VADER: a variable dose-rate external 137Cs irradiator for internal emitter and low dose rate studies.

Authors:  Guy Garty; Yanping Xu; Gary W Johnson; Lubomir B Smilenov; Simon K Joseph; Monica Pujol-Canadell; Helen C Turner; Shanaz A Ghandhi; Qi Wang; Rompin Shih; Robert C Morton; David E Cuniberti; Shad R Morton; Carlos Bueno-Beti; Thomas L Morgan; Peter F Caracappa; Evagelia C Laiakis; Albert J Fornace; Sally A Amundson; David J Brenner
Journal:  Sci Rep       Date:  2020-11-16       Impact factor: 4.379

10.  Inter-laboratory automation of the in vitro micronucleus assay using imaging flow cytometry and deep learning.

Authors:  George E Johnson; Paul Rees; John W Wills; Jatin R Verma; Benjamin J Rees; Danielle S G Harte; Qiellor Haxhiraj; Claire M Barnes; Rachel Barnes; Matthew A Rodrigues; Minh Doan; Andrew Filby; Rachel E Hewitt; Catherine A Thornton; James G Cronin; Julia D Kenny; Ruby Buckley; Anthony M Lynch; Anne E Carpenter; Huw D Summers
Journal:  Arch Toxicol       Date:  2021-07-10       Impact factor: 5.153

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