Literature DB >> 33490987

Modulating organelle distribution using light-inducible heterodimerization in C. elegans.

Tobias B Dansen1, Sasha De Henau1.   

Abstract

The relative positioning of organelles underlies fundamental cellular processes, including signaling, polarization, and cellular growth. Here, we describe the usage of a light-dependent heterodimerization system, LOVpep-ePDZ, to alter organelle positioning locally and reversibly in order to study the functional consequences of organelle positioning. The protocol gives details on how to accomplish expression of fusion proteins encoding this system, describes the imaging parameters to achieve subcellular activation in C. elegans, and may be adapted for use in other model systems. For complete details on the use and execution of this protocol, please refer to De Henau et al. (2020).
© 2020 The Author(s).

Entities:  

Keywords:  Cell biology; Microscopy; Model organisms

Mesh:

Substances:

Year:  2021        PMID: 33490987      PMCID: PMC7811173          DOI: 10.1016/j.xpro.2020.100273

Source DB:  PubMed          Journal:  STAR Protoc        ISSN: 2666-1667


  32 in total

1.  Codon adaptation-based control of protein expression in C. elegans.

Authors:  Stefanie Redemann; Siegfried Schloissnig; Susanne Ernst; Andrey Pozniakowsky; Swathi Ayloo; Antony A Hyman; Henrik Bringmann
Journal:  Nat Methods       Date:  2011-01-30       Impact factor: 28.547

Review 2.  Genetic mapping and manipulation: chapter 1--Introduction and basics.

Authors:  David Fay
Journal:  WormBook       Date:  2006-02-17

3.  Correlating in Vitro and in Vivo Activities of Light-Inducible Dimers: A Cellular Optogenetics Guide.

Authors:  Ryan A Hallett; Seth P Zimmerman; Hayretin Yumerefendi; James E Bear; Brian Kuhlman
Journal:  ACS Synth Biol       Date:  2015-10-30       Impact factor: 5.110

4.  Reversible protein inactivation by optogenetic trapping in cells.

Authors:  Sangkyu Lee; Hyerim Park; Taeyoon Kyung; Na Yeon Kim; Sungsoo Kim; Jihoon Kim; Won Do Heo
Journal:  Nat Methods       Date:  2014-05-04       Impact factor: 28.547

5.  Mitochondria-Derived H2O2 Promotes Symmetry Breaking of the C. elegans Zygote.

Authors:  Sasha De Henau; Marc Pagès-Gallego; Willem-Jan Pannekoek; Tobias B Dansen
Journal:  Dev Cell       Date:  2020-04-09       Impact factor: 12.270

6.  Structural basis of a phototropin light switch.

Authors:  Shannon M Harper; Lori C Neil; Kevin H Gardner
Journal:  Science       Date:  2003-09-12       Impact factor: 47.728

7.  Tuning the Binding Affinities and Reversion Kinetics of a Light Inducible Dimer Allows Control of Transmembrane Protein Localization.

Authors:  Seth P Zimmerman; Ryan A Hallett; Ashley M Bourke; James E Bear; Matthew J Kennedy; Brian Kuhlman
Journal:  Biochemistry       Date:  2016-09-08       Impact factor: 3.162

8.  PRG-1 and 21U-RNAs interact to form the piRNA complex required for fertility in C. elegans.

Authors:  Pedro J Batista; J Graham Ruby; Julie M Claycomb; Rosaria Chiang; Noah Fahlgren; Kristin D Kasschau; Daniel A Chaves; Weifeng Gu; Jessica J Vasale; Shenghua Duan; Darryl Conte; Shujun Luo; Gary P Schroth; James C Carrington; David P Bartel; Craig C Mello
Journal:  Mol Cell       Date:  2008-06-19       Impact factor: 17.970

9.  SapTrap Assembly of Caenorhabditis elegans MosSCI Transgene Vectors.

Authors:  Xintao Fan; Sasha De Henau; Julia Feinstein; Stephanie I Miller; Bingjie Han; Christian Frøkjær-Jensen; Erik E Griffin
Journal:  G3 (Bethesda)       Date:  2020-02-06       Impact factor: 3.154

10.  Spatiotemporal control of cell signalling using a light-switchable protein interaction.

Authors:  Anselm Levskaya; Orion D Weiner; Wendell A Lim; Christopher A Voigt
Journal:  Nature       Date:  2009-09-13       Impact factor: 49.962

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