Literature DB >> 24793453

Reversible protein inactivation by optogenetic trapping in cells.

Sangkyu Lee1, Hyerim Park2, Taeyoon Kyung3, Na Yeon Kim3, Sungsoo Kim3, Jihoon Kim3, Won Do Heo4.   

Abstract

We present a versatile platform to inactivate proteins in living cells using light, light-activated reversible inhibition by assembled trap (LARIAT), which sequesters target proteins into complexes formed by multimeric proteins and a blue light-mediated heterodimerization module. Using LARIAT, we inhibited diverse proteins that modulate cytoskeleton, lipid signaling and cell cycle with high spatiotemporal resolution. Use of single-domain antibodies extends the method to target proteins containing specific epitopes, including GFP.

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Year:  2014        PMID: 24793453     DOI: 10.1038/nmeth.2940

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  28 in total

1.  Global analysis of protein localization in budding yeast.

Authors:  Won-Ki Huh; James V Falvo; Luke C Gerke; Adam S Carroll; Russell W Howson; Jonathan S Weissman; Erin K O'Shea
Journal:  Nature       Date:  2003-10-16       Impact factor: 49.962

2.  Switch-of-function mutants based on morphology classification of Ras superfamily small GTPases.

Authors:  Won Do Heo; Tobias Meyer
Journal:  Cell       Date:  2003-05-02       Impact factor: 41.582

Review 3.  Microtubules as a target for anticancer drugs.

Authors:  Mary Ann Jordan; Leslie Wilson
Journal:  Nat Rev Cancer       Date:  2004-04       Impact factor: 60.716

4.  Cooperative activation of PI3K by Ras and Rho family small GTPases.

Authors:  Hee Won Yang; Min-Gyoung Shin; Sangkyu Lee; Jeong-Rae Kim; Wei Sun Park; Kwang-Hyun Cho; Tobias Meyer; Won Do Heo
Journal:  Mol Cell       Date:  2012-06-07       Impact factor: 17.970

5.  Optogenetic protein clustering and signaling activation in mammalian cells.

Authors:  Lukasz J Bugaj; Atri T Choksi; Colin K Mesuda; Ravi S Kane; David V Schaffer
Journal:  Nat Methods       Date:  2013-02-03       Impact factor: 28.547

6.  ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.

Authors:  Akihisa Matsuyama; Ritsuko Arai; Yoko Yashiroda; Atsuko Shirai; Ayako Kamata; Shigeko Sekido; Yumiko Kobayashi; Atsushi Hashimoto; Makiko Hamamoto; Yasushi Hiraoka; Sueharu Horinouchi; Minoru Yoshida
Journal:  Nat Biotechnol       Date:  2006-06-25       Impact factor: 54.908

7.  In vivo and in vitro characterization of the sequence requirement for oligomer formation of Ca2+/calmodulin-dependent protein kinase IIalpha.

Authors:  K Shen; T Meyer
Journal:  J Neurochem       Date:  1998-01       Impact factor: 5.372

8.  Rapid blue-light-mediated induction of protein interactions in living cells.

Authors:  Matthew J Kennedy; Robert M Hughes; Leslie A Peteya; Joel W Schwartz; Michael D Ehlers; Chandra L Tucker
Journal:  Nat Methods       Date:  2010-10-31       Impact factor: 28.547

9.  A genetically encoded photoactivatable Rac controls the motility of living cells.

Authors:  Yi I Wu; Daniel Frey; Oana I Lungu; Angelika Jaehrig; Ilme Schlichting; Brian Kuhlman; Klaus M Hahn
Journal:  Nature       Date:  2009-08-19       Impact factor: 49.962

10.  A light-inducible organelle-targeting system for dynamically activating and inactivating signaling in budding yeast.

Authors:  Xiaojing Yang; Anna Payne-Tobin Jost; Orion D Weiner; Chao Tang
Journal:  Mol Biol Cell       Date:  2013-06-12       Impact factor: 4.138

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  77 in total

1.  Optogenetic control of endogenous Ca(2+) channels in vivo.

Authors:  Taeyoon Kyung; Sangkyu Lee; Jung Eun Kim; Taesup Cho; Hyerim Park; Yun-Mi Jeong; Dongkyu Kim; Anna Shin; Sungsoo Kim; Jinhee Baek; Jihoon Kim; Na Yeon Kim; Doyeon Woo; Sujin Chae; Cheol-Hee Kim; Hee-Sup Shin; Yong-Mahn Han; Daesoo Kim; Won Do Heo
Journal:  Nat Biotechnol       Date:  2015-09-14       Impact factor: 54.908

2.  Predictive Spatiotemporal Manipulation of Signaling Perturbations Using Optogenetics.

Authors:  Leo Valon; Fred Etoc; Amanda Remorino; Florencia di Pietro; Xavier Morin; Maxime Dahan; Mathieu Coppey
Journal:  Biophys J       Date:  2015-11-03       Impact factor: 4.033

3.  Spatiotemporal Control of Intracellular Phase Transitions Using Light-Activated optoDroplets.

Authors:  Yongdae Shin; Joel Berry; Nicole Pannucci; Mikko P Haataja; Jared E Toettcher; Clifford P Brangwynne
Journal:  Cell       Date:  2016-12-29       Impact factor: 41.582

Review 4.  Illuminating cell signalling with optogenetic tools.

Authors:  Doug Tischer; Orion D Weiner
Journal:  Nat Rev Mol Cell Biol       Date:  2014-07-16       Impact factor: 94.444

Review 5.  Subcellular optogenetics - controlling signaling and single-cell behavior.

Authors:  W K Ajith Karunarathne; Patrick R O'Neill; Narasimhan Gautam
Journal:  J Cell Sci       Date:  2014-11-28       Impact factor: 5.285

6.  Cell biology: Versatile clusters formed by light.

Authors:  Tal Nawy
Journal:  Nat Methods       Date:  2014-11       Impact factor: 28.547

Review 7.  Optogenetic toolkit for precise control of calcium signaling.

Authors:  Guolin Ma; Shufan Wen; Lian He; Yun Huang; Youjun Wang; Yubin Zhou
Journal:  Cell Calcium       Date:  2017-01-16       Impact factor: 6.817

8.  Design and Implementation of an Automated Illuminating, Culturing, and Sampling System for Microbial Optogenetic Applications.

Authors:  Cameron J Stewart; Megan N McClean
Journal:  J Vis Exp       Date:  2017-02-19       Impact factor: 1.355

9.  Reversible optogenetic control of kinase activity during differentiation and embryonic development.

Authors:  Vishnu V Krishnamurthy; John S Khamo; Wenyan Mei; Aurora J Turgeon; Humza M Ashraf; Payel Mondal; Dil B Patel; Noah Risner; Ellen E Cho; Jing Yang; Kai Zhang
Journal:  Development       Date:  2016-10-03       Impact factor: 6.868

10.  Optogenetic toolkit reveals the role of Ca2+ sparklets in coordinated cell migration.

Authors:  Jin Man Kim; Minji Lee; Nury Kim; Won Do Heo
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-17       Impact factor: 11.205

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