Literature DB >> 18571452

PRG-1 and 21U-RNAs interact to form the piRNA complex required for fertility in C. elegans.

Pedro J Batista1, J Graham Ruby, Julie M Claycomb, Rosaria Chiang, Noah Fahlgren, Kristin D Kasschau, Daniel A Chaves, Weifeng Gu, Jessica J Vasale, Shenghua Duan, Darryl Conte, Shujun Luo, Gary P Schroth, James C Carrington, David P Bartel, Craig C Mello.   

Abstract

In metazoans, Piwi-related Argonaute proteins have been linked to germline maintenance, and to a class of germline-enriched small RNAs termed piRNAs. Here we show that an abundant class of 21 nucleotide small RNAs (21U-RNAs) are expressed in the C. elegans germline, interact with the C. elegans Piwi family member PRG-1, and depend on PRG-1 activity for their accumulation. The PRG-1 protein is expressed throughout development and localizes to nuage-like structures called P granules. Although 21U-RNA loci share a conserved upstream sequence motif, the mature 21U-RNAs are not conserved and, with few exceptions, fail to exhibit complementarity or evidence for direct regulation of other expressed sequences. Our findings demonstrate that 21U-RNAs are the piRNAs of C. elegans and link this class of small RNAs and their associated Piwi Argonaute to the maintenance of temperature-dependent fertility.

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Year:  2008        PMID: 18571452      PMCID: PMC2570341          DOI: 10.1016/j.molcel.2008.06.002

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  40 in total

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2.  Analysis of the C. elegans Argonaute family reveals that distinct Argonautes act sequentially during RNAi.

Authors:  Erbay Yigit; Pedro J Batista; Yanxia Bei; Ka Ming Pang; Chun-Chieh G Chen; Niraj H Tolia; Leemor Joshua-Tor; Shohei Mitani; Martin J Simard; Craig C Mello
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Journal:  Mol Cell       Date:  2007-07-06       Impact factor: 17.970

4.  Characterization of the piRNA complex from rat testes.

Authors:  Nelson C Lau; Anita G Seto; Jinkuk Kim; Satomi Kuramochi-Miyagawa; Toru Nakano; David P Bartel; Robert E Kingston
Journal:  Science       Date:  2006-06-15       Impact factor: 47.728

5.  A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila.

Authors:  Lalith S Gunawardane; Kuniaki Saito; Kazumichi M Nishida; Keita Miyoshi; Yoshinori Kawamura; Tomoko Nagami; Haruhiko Siomi; Mikiko C Siomi
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Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

7.  The mouse homolog of HEN1 is a potential methylase for Piwi-interacting RNAs.

Authors:  Yohei Kirino; Zissimos Mourelatos
Journal:  RNA       Date:  2007-07-24       Impact factor: 4.942

8.  A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in Zebrafish.

Authors:  Saskia Houwing; Leonie M Kamminga; Eugene Berezikov; Daniela Cronembold; Angélique Girard; Hans van den Elst; Dmitri V Filippov; Heiko Blaser; Erez Raz; Cecilia B Moens; Ronald H A Plasterk; Gregory J Hannon; Bruce W Draper; René F Ketting
Journal:  Cell       Date:  2007-04-06       Impact factor: 41.582

9.  miwi, a murine homolog of piwi, encodes a cytoplasmic protein essential for spermatogenesis.

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Authors:  Michael D Horwich; Chengjian Li; Christian Matranga; Vasily Vagin; Gwen Farley; Peng Wang; Phillip D Zamore
Journal:  Curr Biol       Date:  2007-06-28       Impact factor: 10.834

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  284 in total

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Authors:  Ryan J Taft; Cas Simons; Satu Nahkuri; Harald Oey; Darren J Korbie; Timothy R Mercer; Jeff Holst; William Ritchie; Justin J-L Wong; John E J Rasko; Daniel S Rokhsar; Bernard M Degnan; John S Mattick
Journal:  Nat Struct Mol Biol       Date:  2010-07-11       Impact factor: 15.369

3.  A conserved germline multipotency program.

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5.  piRNAs and piRNA-Dependent siRNAs Protect Conserved and Essential C. elegans Genes from Misrouting into the RNAi Pathway.

Authors:  Carolyn M Phillips; Kristen C Brown; Brooke E Montgomery; Gary Ruvkun; Taiowa A Montgomery
Journal:  Dev Cell       Date:  2015-08-13       Impact factor: 12.270

Review 6.  Small RNAs as guardians of the genome.

Authors:  Colin D Malone; Gregory J Hannon
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

7.  A Neuronal piRNA Pathway Inhibits Axon Regeneration in C. elegans.

Authors:  Kyung Won Kim; Ngang Heok Tang; Matthew G Andrusiak; Zilu Wu; Andrew D Chisholm; Yishi Jin
Journal:  Neuron       Date:  2018-01-27       Impact factor: 17.173

Review 8.  RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond.

Authors:  Stephane E Castel; Robert A Martienssen
Journal:  Nat Rev Genet       Date:  2013-02       Impact factor: 53.242

9.  RNAi pathways contribute to developmental history-dependent phenotypic plasticity in C. elegans.

Authors:  Sarah E Hall; Gung-Wei Chirn; Nelson C Lau; Piali Sengupta
Journal:  RNA       Date:  2013-01-17       Impact factor: 4.942

10.  Virus discovery by deep sequencing and assembly of virus-derived small silencing RNAs.

Authors:  Qingfa Wu; Yingjun Luo; Rui Lu; Nelson Lau; Eric C Lai; Wan-Xiang Li; Shou-Wei Ding
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-04       Impact factor: 11.205

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