Literature DB >> 33374994

Slipstreaming Mother Machine: A Microfluidic Device for Single-Cell Dynamic Imaging of Yeast.

David C Durán1, César A Hernández2, Elizabeth Suesca1, Rubén Acevedo1, Ivón M Acosta1,3, Diana A Forero1,3, Francisco E Rozo1,3, Juan M Pedraza1.   

Abstract

The yeast Saccharomyces cerevisiae is one of the most basic model organisms for studies of aging and other phenomena such as division strategies. These organisms have been typically studied with the use of microfluidic devices to keep cells trapped while under a flow of fresh media. However, all of the existing devices trap cells mechanically, subjecting them to pressures that may affect cell physiology. There is evidence mechanical pressure affects growth rate and the movement of intracellular components, so it is quite possible that it affects other physiological aspects such as aging. To allow studies with the lowest influence of mechanical pressure, we designed and fabricated a device that takes advantage of the slipstreaming effect. In slipstreaming, moving fluids that encounter a barrier flow around it forming a pressure gradient behind it. We trap mother cells in this region and force daughter cells to be in the negative pressure gradient region so that they are taken away by the flow. Additionally, this device can be fabricated using low resolution lithography techniques, which makes it less expensive than devices that require photolithography masks with resolution under 5 µm. With this device, it is possible to measure some of the most interesting aspects of yeast dynamics such as growth rates and Replicative Life Span. This device should allow future studies to eliminate pressure bias as well as extending the range of labs that can do these types of measurements.

Entities:  

Keywords:  Saccharomyces cerevisiae; microfluidics; mother machine; replicative aging

Year:  2020        PMID: 33374994      PMCID: PMC7822021          DOI: 10.3390/mi12010004

Source DB:  PubMed          Journal:  Micromachines (Basel)        ISSN: 2072-666X            Impact factor:   2.891


  27 in total

1.  Whole lifespan microscopic observation of budding yeast aging through a microfluidic dissection platform.

Authors:  Sung Sik Lee; Ima Avalos Vizcarra; Daphne H E W Huberts; Luke P Lee; Matthias Heinemann
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-14       Impact factor: 11.205

2.  Early telomerase inactivation accelerates aging independently of telomere length.

Authors:  Zhengwei Xie; Kyle A Jay; Dana L Smith; Yi Zhang; Zairan Liu; Jiashun Zheng; Ruilin Tian; Hao Li; Elizabeth H Blackburn
Journal:  Cell       Date:  2015-02-26       Impact factor: 41.582

3.  Aging yeast cells undergo a sharp entry into senescence unrelated to the loss of mitochondrial membrane potential.

Authors:  Steffen Fehrmann; Camille Paoletti; Youlian Goulev; Andrei Ungureanu; Hugo Aguilaniu; Gilles Charvin
Journal:  Cell Rep       Date:  2013-12-12       Impact factor: 9.423

4.  Regulation of yeast replicative life span by TOR and Sch9 in response to nutrients.

Authors:  Matt Kaeberlein; R Wilson Powers; Kristan K Steffen; Eric A Westman; Di Hu; Nick Dang; Emily O Kerr; Kathryn T Kirkland; Stanley Fields; Brian K Kennedy
Journal:  Science       Date:  2005-11-18       Impact factor: 47.728

5.  Mechano-chemostats to study the effects of compressive stress on yeast.

Authors:  L J Holt; O Hallatschek; M Delarue
Journal:  Methods Cell Biol       Date:  2018-07-19       Impact factor: 1.441

Review 6.  Microfluidic technologies for yeast replicative lifespan studies.

Authors:  Kenneth L Chen; Matthew M Crane; Matt Kaeberlein
Journal:  Mech Ageing Dev       Date:  2016-03-23       Impact factor: 5.432

7.  Yeast Replicator: A High-Throughput Multiplexed Microfluidics Platform for Automated Measurements of Single-Cell Aging.

Authors:  Ping Liu; Thomas Z Young; Murat Acar
Journal:  Cell Rep       Date:  2015-10-09       Impact factor: 9.423

8.  A microfluidic system for dynamic yeast cell imaging.

Authors:  Philip J Lee; Noah C Helman; Wendell A Lim; Paul J Hung
Journal:  Biotechniques       Date:  2008-01       Impact factor: 1.993

9.  Single cell analysis of yeast replicative aging using a new generation of microfluidic device.

Authors:  Yi Zhang; Chunxiong Luo; Ke Zou; Zhengwei Xie; Onn Brandman; Qi Ouyang; Hao Li
Journal:  PLoS One       Date:  2012-11-08       Impact factor: 3.240

10.  A microfluidic system for studying ageing and dynamic single-cell responses in budding yeast.

Authors:  Matthew M Crane; Ivan B N Clark; Elco Bakker; Stewart Smith; Peter S Swain
Journal:  PLoS One       Date:  2014-06-20       Impact factor: 3.240

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  1 in total

Review 1.  Platforms for Optogenetic Stimulation and Feedback Control.

Authors:  Sant Kumar; Mustafa Khammash
Journal:  Front Bioeng Biotechnol       Date:  2022-06-08
  1 in total

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