Literature DB >> 27015709

Microfluidic technologies for yeast replicative lifespan studies.

Kenneth L Chen1, Matthew M Crane2, Matt Kaeberlein3.   

Abstract

The budding yeast Saccharomyces cerevisiae has been used as a model organism for the study of aging for over 50 years. In this time, the canonical aging experiment-replicative lifespan analysis by manual microdissection-has remained essentially unchanged. Recently, microfluidic technologies have been developed that may be able to substitute for this time- and labor-intensive procedure. These technologies also allow cell physiology to be observed throughout the entire lifetime. Here, we review these devices, novel observations they have made possible, and some of the current system limitations.
Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

Entities:  

Keywords:  Lifespan; Microdissection; Microfluidics; Microscopy; Replicative aging; Yeast

Mesh:

Year:  2016        PMID: 27015709      PMCID: PMC5035173          DOI: 10.1016/j.mad.2016.03.009

Source DB:  PubMed          Journal:  Mech Ageing Dev        ISSN: 0047-6374            Impact factor:   5.432


  57 in total

1.  Whole lifespan microscopic observation of budding yeast aging through a microfluidic dissection platform.

Authors:  Sung Sik Lee; Ima Avalos Vizcarra; Daphne H E W Huberts; Luke P Lee; Matthias Heinemann
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-14       Impact factor: 11.205

2.  Aging yeast cells undergo a sharp entry into senescence unrelated to the loss of mitochondrial membrane potential.

Authors:  Steffen Fehrmann; Camille Paoletti; Youlian Goulev; Andrei Ungureanu; Hugo Aguilaniu; Gilles Charvin
Journal:  Cell Rep       Date:  2013-12-12       Impact factor: 9.423

3.  Long-term model predictive control of gene expression at the population and single-cell levels.

Authors:  Jannis Uhlendorf; Agnès Miermont; Thierry Delaveau; Gilles Charvin; François Fages; Samuel Bottani; Gregory Batt; Pascal Hersen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-14       Impact factor: 11.205

4.  High-throughput analysis of yeast replicative aging using a microfluidic system.

Authors:  Myeong Chan Jo; Wei Liu; Liang Gu; Weiwei Dang; Lidong Qin
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-13       Impact factor: 11.205

5.  Regulation of yeast replicative life span by TOR and Sch9 in response to nutrients.

Authors:  Matt Kaeberlein; R Wilson Powers; Kristan K Steffen; Eric A Westman; Di Hu; Nick Dang; Emily O Kerr; Kathryn T Kirkland; Stanley Fields; Brian K Kennedy
Journal:  Science       Date:  2005-11-18       Impact factor: 47.728

Review 6.  Budding yeast as a model organism to study the effects of age.

Authors:  Annina Denoth Lippuner; Thomas Julou; Yves Barral
Journal:  FEMS Microbiol Rev       Date:  2014-02-26       Impact factor: 16.408

7.  A mutation in the ATP2 gene abrogates the age asymmetry between mother and daughter cells of the yeast Saccharomyces cerevisiae.

Authors:  Chi-Yung Lai; Ewa Jaruga; Corina Borghouts; S Michal Jazwinski
Journal:  Genetics       Date:  2002-09       Impact factor: 4.562

8.  Single cell analysis of yeast replicative aging using a new generation of microfluidic device.

Authors:  Yi Zhang; Chunxiong Luo; Ke Zou; Zhengwei Xie; Onn Brandman; Qi Ouyang; Hao Li
Journal:  PLoS One       Date:  2012-11-08       Impact factor: 3.240

9.  Two routes to senescence revealed by real-time analysis of telomerase-negative single lineages.

Authors:  Zhou Xu; Emilie Fallet; Camille Paoletti; Steffen Fehrmann; Gilles Charvin; Maria Teresa Teixeira
Journal:  Nat Commun       Date:  2015-07-09       Impact factor: 14.919

10.  Protein aggregates are associated with replicative aging without compromising protein quality control.

Authors:  Juha Saarikangas; Yves Barral
Journal:  Elife       Date:  2015-11-06       Impact factor: 8.140

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  33 in total

1.  Translational Geroscience: From invertebrate models to companion animal and human interventions.

Authors:  Mitchell B Lee; Matt Kaeberlein
Journal:  Transl Med Aging       Date:  2018-08-17

2.  Using Microfluidic Devices to Measure Lifespan and Cellular Phenotypes in Single Budding Yeast Cells.

Authors:  Ke Zou; Diana S Ren; Qi Ou-Yang; Hao Li; Jiashun Zheng
Journal:  J Vis Exp       Date:  2017-03-30       Impact factor: 1.355

3.  Defining the impact of mutation accumulation on replicative lifespan in yeast using cancer-associated mutator phenotypes.

Authors:  Mitchell B Lee; Ian T Dowsett; Daniel T Carr; Brian M Wasko; Sarah G Stanton; Michael S Chung; Niloufar Ghodsian; Anna Bode; Michael G Kiflezghi; Priya A Uppal; Katherine A Grayden; Yordanos C Elala; Thao T Tang; Ngoc H B Tran; Thu H B Tran; Anh B Diep; Michael Hope; Daniel E L Promislow; Scott R Kennedy; Matt Kaeberlein; Alan J Herr
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-04       Impact factor: 11.205

Review 4.  Dietary restriction and lifespan: Lessons from invertebrate models.

Authors:  Pankaj Kapahi; Matt Kaeberlein; Malene Hansen
Journal:  Ageing Res Rev       Date:  2016-12-19       Impact factor: 10.895

Review 5.  Hydrodynamics in Cell Studies.

Authors:  Deborah Huber; Ali Oskooei; Xavier Casadevall I Solvas; Govind V Kaigala
Journal:  Chem Rev       Date:  2018-02-08       Impact factor: 60.622

6.  Divergent Aging of Isogenic Yeast Cells Revealed through Single-Cell Phenotypic Dynamics.

Authors:  Meng Jin; Yang Li; Richard O'Laughlin; Philip Bittihn; Lorraine Pillus; Lev S Tsimring; Jeff Hasty; Nan Hao
Journal:  Cell Syst       Date:  2019-03-06       Impact factor: 10.304

Review 7.  Cell organelles and yeast longevity: an intertwined regulation.

Authors:  Riddhi Banerjee; Neha Joshi; Shirisha Nagotu
Journal:  Curr Genet       Date:  2019-09-18       Impact factor: 3.886

8.  The paths of mortality: how understanding the biology of aging can help explain systems behavior of single cells.

Authors:  Matthew M Crane; Matt Kaeberlein
Journal:  Curr Opin Syst Biol       Date:  2017-12-06

Review 9.  Microfluidics in systems biology-hype or truly useful?

Authors:  Yi Liu; Hang Lu
Journal:  Curr Opin Biotechnol       Date:  2016-06       Impact factor: 9.740

10.  A Microfluidic Device for Massively Parallel, Whole-lifespan Imaging of Single Fission Yeast Cells.

Authors:  Stephen K Jones; Eric C Spivey; James R Rybarski; Ilya J Finkelstein
Journal:  Bio Protoc       Date:  2018-04-05
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