Literature DB >> 22421136

Whole lifespan microscopic observation of budding yeast aging through a microfluidic dissection platform.

Sung Sik Lee1, Ima Avalos Vizcarra, Daphne H E W Huberts, Luke P Lee, Matthias Heinemann.   

Abstract

Important insights into aging have been generated with the genetically tractable and short-lived budding yeast. However, it is still impossible today to continuously track cells by high-resolution microscopic imaging (e.g., fluorescent imaging) throughout their entire lifespan. Instead, the field still needs to rely on a 50-y-old laborious and time-consuming method to assess the lifespan of yeast cells and to isolate differentially aged cells for microscopic snapshots via manual dissection of daughter cells from the larger mother cell. Here, we are unique in achieving continuous and high-resolution microscopic imaging of the entire replicative lifespan of single yeast cells. Our microfluidic dissection platform features an optically prealigned single focal plane and an integrated array of soft elastomer-based micropads, used together to allow for trapping of mother cells, removal of daughter cells, monitoring gradual changes in aging, and unprecedented microscopic imaging of the whole aging process. Using the platform, we found remarkable age-associated changes in phenotypes (e.g., that cells can show strikingly differential cell and vacuole morphologies at the moment of their deaths), indicating substantial heterogeneity in cell aging and death. We envision the microfluidic dissection platform to become a major tool in aging research.

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Year:  2012        PMID: 22421136      PMCID: PMC3324001          DOI: 10.1073/pnas.1113505109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

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Journal:  Nature       Date:  1959-06-20       Impact factor: 49.962

2.  Cell biology. Twists in the tale of the aging yeast.

Authors:  Jasper Rine
Journal:  Science       Date:  2005-11-18       Impact factor: 47.728

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4.  Hsl7 localizes to a septin ring and serves as an adapter in a regulatory pathway that relieves tyrosine phosphorylation of Cdc28 protein kinase in Saccharomyces cerevisiae.

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Journal:  Mol Cell Biol       Date:  1999-10       Impact factor: 4.272

5.  Elimination of replication block protein Fob1 extends the life span of yeast mother cells.

Authors:  P A Defossez; R Prusty; M Kaeberlein; S J Lin; P Ferrigno; P A Silver; R L Keil; L Guarente
Journal:  Mol Cell       Date:  1999-04       Impact factor: 17.970

6.  The SIR2/3/4 complex and SIR2 alone promote longevity in Saccharomyces cerevisiae by two different mechanisms.

Authors:  M Kaeberlein; M McVey; L Guarente
Journal:  Genes Dev       Date:  1999-10-01       Impact factor: 11.361

7.  Microfluidics device for single cell gene expression analysis in Saccharomyces cerevisiae.

Authors:  James Ryley; Olivia M Pereira-Smith
Journal:  Yeast       Date:  2006 Oct-Nov       Impact factor: 3.239

8.  Nim1-related kinases coordinate cell cycle progression with the organization of the peripheral cytoskeleton in yeast.

Authors:  Y Barral; M Parra; S Bidlingmaier; M Snyder
Journal:  Genes Dev       Date:  1999-01-15       Impact factor: 11.361

9.  Structural heterogeneity in populations of the budding yeast Saccharomyces cerevisiae.

Authors:  M Vanoni; M Vai; L Popolo; L Alberghina
Journal:  J Bacteriol       Date:  1983-12       Impact factor: 3.490

10.  Monitoring dynamics of single-cell gene expression over multiple cell cycles.

Authors:  Scott Cookson; Natalie Ostroff; Wyming Lee Pang; Dmitri Volfson; Jeff Hasty
Journal:  Mol Syst Biol       Date:  2005-11-22       Impact factor: 11.429

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  90 in total

1.  Cell biology: High-tech yeast ageing.

Authors:  Michael Polymenis; Brian K Kennedy
Journal:  Nature       Date:  2012-06-06       Impact factor: 49.962

2.  Protein biogenesis machinery is a driver of replicative aging in yeast.

Authors:  Georges E Janssens; Anne C Meinema; Javier González; Justina C Wolters; Alexander Schmidt; Victor Guryev; Rainer Bischoff; Ernst C Wit; Liesbeth M Veenhoff; Matthias Heinemann
Journal:  Elife       Date:  2015-12-01       Impact factor: 8.140

3.  Maximum Caliber Can Build and Infer Models of Oscillation in a Three-Gene Feedback Network.

Authors:  Taylor Firman; Anar Amgalan; Kingshuk Ghosh
Journal:  J Phys Chem B       Date:  2019-01-09       Impact factor: 2.991

4.  Versatile, simple-to-use microfluidic cell-culturing chip for long-term, high-resolution, time-lapse imaging.

Authors:  Olivier Frey; Fabian Rudolf; Gregor W Schmidt; Andreas Hierlemann
Journal:  Anal Chem       Date:  2015-04-10       Impact factor: 6.986

5.  Culture and motion analysis of diatom Bacillaria paradoxa on a microfluidic platform.

Authors:  Jun Cai; Mingli Chen; Yu Wang; Junfeng Pan; Aobo Li; Deyuan Zhang
Journal:  Curr Microbiol       Date:  2013-06-23       Impact factor: 2.188

6.  Continuous high-resolution microscopic observation of replicative aging in budding yeast.

Authors:  Daphne H E W Huberts; Georges E Janssens; Sung Sik Lee; Ima Avalos Vizcarra; Matthias Heinemann
Journal:  J Vis Exp       Date:  2013-08-20       Impact factor: 1.355

7.  High-throughput microfluidics to control and measure signaling dynamics in single yeast cells.

Authors:  Anders S Hansen; Nan Hao; Erin K O'Shea
Journal:  Nat Protoc       Date:  2015-07-09       Impact factor: 13.491

8.  High-throughput analysis of yeast replicative aging using a microfluidic system.

Authors:  Myeong Chan Jo; Wei Liu; Liang Gu; Weiwei Dang; Lidong Qin
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-13       Impact factor: 11.205

Review 9.  The good and the bad of being connected: the integrons of aging.

Authors:  Andrew Dillin; Daniel E Gottschling; Thomas Nyström
Journal:  Curr Opin Cell Biol       Date:  2013-12-30       Impact factor: 8.382

10.  The paths of mortality: how understanding the biology of aging can help explain systems behavior of single cells.

Authors:  Matthew M Crane; Matt Kaeberlein
Journal:  Curr Opin Syst Biol       Date:  2017-12-06
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