Literature DB >> 32796105

The roles of long-range proton-coupled electron transfer in the directionality and efficiency of [FeFe]-hydrogenases.

Oliver Lampret1, Jifu Duan1, Eckhard Hofmann2, Martin Winkler1, Fraser A Armstrong3, Thomas Happe4.   

Abstract

As paradigms for proton-coupled electron transfer in enzymes and benchmarks for a fully renewable H2 technology, [FeFe]-hydrogenases behave as highly reversible electrocatalysts when immobilized on an electrode, operating in both catalytic directions with minimal overpotential requirement. Using the [FeFe]-hydrogenases from Clostridium pasteurianum (CpI) and Chlamydomonas reinhardtii (CrHydA1) we have conducted site-directed mutagenesis and protein film electrochemistry to determine how efficient catalysis depends on the long-range coupling of electron and proton transfer steps. Importantly, the electron and proton transfer pathways in [FeFe]-hydrogenases are well separated from each other in space. Variants with conservative substitutions (glutamate to aspartate) in either of two positions in the proton-transfer pathway retain significant activity and reveal the consequences of slowing down proton transfer for both catalytic directions over a wide range of pH and potential values. Proton reduction in the variants is impaired mainly by limiting the turnover rate, which drops sharply as the pH is raised, showing that proton capture from bulk solvent becomes critical. In contrast, hydrogen oxidation is affected in two ways: by limiting the turnover rate and by a large overpotential requirement that increases as the pH is raised, consistent with the accumulation of a reduced and protonated intermediate. A unique observation having fundamental significance is made under conditions where the variants still retain sufficient catalytic activity in both directions: An inflection appears as the catalytic current switches direction at the 2H+/H2 thermodynamic potential, clearly signaling a departure from electrocatalytic reversibility as electron and proton transfers begin to be decoupled.

Entities:  

Keywords:  catalyst; electrocatalysis; hydrogenase; proton-coupled electron transfer; redox enzymes

Mesh:

Substances:

Year:  2020        PMID: 32796105      PMCID: PMC7456106          DOI: 10.1073/pnas.2007090117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  74 in total

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Authors:  Michel Frey
Journal:  Chembiochem       Date:  2002-03-01       Impact factor: 3.164

2.  CO-Bridged H-Cluster Intermediates in the Catalytic Mechanism of [FeFe]-Hydrogenase CaI.

Authors:  Michael W Ratzloff; Jacob H Artz; David W Mulder; Reuben T Collins; Thomas E Furtak; Paul W King
Journal:  J Am Chem Soc       Date:  2018-06-07       Impact factor: 15.419

3.  Optimizing conditions for utilization of an H2 oxidation catalyst with outer coordination sphere functionalities.

Authors:  Arnab Dutta; Bojana Ginovska; Simone Raugei; John A S Roberts; Wendy J Shaw
Journal:  Dalton Trans       Date:  2016-06-14       Impact factor: 4.390

4.  Roles of the F-domain in [FeFe] hydrogenase.

Authors:  Charles Gauquelin; Carole Baffert; Pierre Richaud; Emma Kamionka; Emilien Etienne; David Guieysse; Laurence Girbal; Vincent Fourmond; Isabelle André; Bruno Guigliarelli; Christophe Léger; Philippe Soucaille; Isabelle Meynial-Salles
Journal:  Biochim Biophys Acta Bioenerg       Date:  2017-08-24       Impact factor: 3.991

5.  Interplay between CN- Ligands and the Secondary Coordination Sphere of the H-Cluster in [FeFe]-Hydrogenases.

Authors:  Oliver Lampret; Agnieszka Adamska-Venkatesh; Hannes Konegger; Florian Wittkamp; Ulf-Peter Apfel; Edward J Reijerse; Wolfgang Lubitz; Olaf Rüdiger; Thomas Happe; Martin Winkler
Journal:  J Am Chem Soc       Date:  2017-12-07       Impact factor: 15.419

6.  The organometallic active site of [Fe]hydrogenase: models and entatic states.

Authors:  Marcetta Y Darensbourg; Erica J Lyon; Xuan Zhao; Irene P Georgakaki
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-17       Impact factor: 11.205

7.  The electronic structure of the H-cluster in the [FeFe]-hydrogenase from Desulfovibrio desulfuricans: a Q-band 57Fe-ENDOR and HYSCORE study.

Authors:  Alexey Silakov; Eduard J Reijerse; Simon P J Albracht; E Claude Hatchikian; Wolfgang Lubitz
Journal:  J Am Chem Soc       Date:  2007-08-28       Impact factor: 15.419

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Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-28       Impact factor: 11.205

9.  Increasing the rate of hydrogen oxidation without increasing the overpotential: a bio-inspired iron molecular electrocatalyst with an outer coordination sphere proton relay.

Authors:  Jonathan M Darmon; Neeraj Kumar; Elliott B Hulley; Charles J Weiss; Simone Raugei; R Morris Bullock; Monte L Helm
Journal:  Chem Sci       Date:  2015-03-05       Impact factor: 9.825

10.  Spontaneous activation of [FeFe]-hydrogenases by an inorganic [2Fe] active site mimic.

Authors:  Camilla Lambertz; Agnieszka Adamska-Venkates; Trevor Simmons; Julian Esselborn; Gustav Berggren; Jens Noth; Judith Siebel; Anja Hemschemeier; Vincent Artero; Edward Reijerse; Marc Fontecave; Wolfgang Lubitz; Thomas Happe
Journal:  Nat Chem Biol       Date:  2013-08-11       Impact factor: 15.040

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  10 in total

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Authors:  Kazimer L Skubi; Reagan X Hooper; Brandon Q Mercado; Melissa M Bollmeyer; Samantha N MacMillan; Kyle M Lancaster; Patrick L Holland
Journal:  Inorg Chem       Date:  2022-01-05       Impact factor: 5.165

Review 2.  Second and Outer Coordination Sphere Effects in Nitrogenase, Hydrogenase, Formate Dehydrogenase, and CO Dehydrogenase.

Authors:  Sven T Stripp; Benjamin R Duffus; Vincent Fourmond; Christophe Léger; Silke Leimkühler; Shun Hirota; Yilin Hu; Andrew Jasniewski; Hideaki Ogata; Markus W Ribbe
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3.  Informing geometric deep learning with electronic interactions to accelerate quantum chemistry.

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4.  Hydride state accumulation in native [FeFe]-hydrogenase with the physiological reductant H2 supports its catalytic relevance.

Authors:  Moritz Senger; Tobias Kernmayr; Marco Lorenzi; Holly J Redman; Gustav Berggren
Journal:  Chem Commun (Camb)       Date:  2022-06-23       Impact factor: 6.065

5.  Catalytic bias in oxidation-reduction catalysis.

Authors:  David W Mulder; John W Peters; Simone Raugei
Journal:  Chem Commun (Camb)       Date:  2020-12-24       Impact factor: 6.065

6.  Proton-Coupled Electron Transfer Guidelines, Fair and Square.

Authors:  Robin Tyburski; Tianfei Liu; Starla D Glover; Leif Hammarström
Journal:  J Am Chem Soc       Date:  2021-01-06       Impact factor: 15.419

7.  Fast Proton Transport in FeFe Hydrogenase via a Flexible Channel and a Proton Hole Mechanism.

Authors:  Rakesh C Puthenkalathil; Bernd Ensing
Journal:  J Phys Chem B       Date:  2022-01-10       Impact factor: 2.991

8.  Combining metal-metal cooperativity, metal-ligand cooperativity and chemical non-innocence in diiron carbonyl complexes.

Authors:  Cody B van Beek; Nicolaas P van Leest; Martin Lutz; Sander D de Vos; Robertus J M Klein Gebbink; Bas de Bruin; Daniël L J Broere
Journal:  Chem Sci       Date:  2022-01-18       Impact factor: 9.825

9.  The Contribution of Proton-Donor pKa on Reactivity Profiles of [FeFe]-hydrogenases.

Authors:  Effie C Kisgeropoulos; Vivek S Bharadwaj; David W Mulder; Paul W King
Journal:  Front Microbiol       Date:  2022-09-28       Impact factor: 6.064

10.  Characterization of a putative sensory [FeFe]-hydrogenase provides new insight into the role of the active site architecture.

Authors:  Henrik Land; Alina Sekretareva; Ping Huang; Holly J Redman; Brigitta Németh; Nakia Polidori; Lívia S Mészáros; Moritz Senger; Sven T Stripp; Gustav Berggren
Journal:  Chem Sci       Date:  2020-09-21       Impact factor: 9.825

  10 in total

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