Literature DB >> 29792026

CO-Bridged H-Cluster Intermediates in the Catalytic Mechanism of [FeFe]-Hydrogenase CaI.

Michael W Ratzloff1, Jacob H Artz1, David W Mulder1, Reuben T Collins2, Thomas E Furtak2, Paul W King1.   

Abstract

The [FeFe]-hydrogenases ([FeFe] H2ases) catalyze reversible H2 activation at the H-cluster, which is composed of a [4Fe-4S]H subsite linked by a cysteine thiolate to a bridged, organometallic [2Fe-2S] ([2Fe]H) subsite. Profoundly different geometric models of the H-cluster redox states that orchestrate the electron/proton transfer steps of H2 bond activation have been proposed. We have examined this question in the [FeFe] H2ase I from Clostridium acetobutylicum (CaI) by Fourier-transform infrared (FTIR) spectroscopy with temperature annealing and H/D isotope exchange to identify the relevant redox states and define catalytic transitions. One-electron reduction of Hox led to formation of HredH+ ([4Fe-4S]H2+-FeI-FeI) and Hred' ([4Fe-4S]H1+-FeII-FeI), with both states characterized by low frequency μ-CO IR modes consistent with a fully bridged [2Fe]H. Similar μ-CO IR modes were also identified for HredH+ of the [FeFe] H2ase from Chlamydomonas reinhardtii (CrHydA1). The CaI proton-transfer variant C298S showed enrichment of an H/D isotope-sensitive μ-CO mode, a component of the hydride bound H-cluster IR signal, Hhyd. Equilibrating CaI with increasing amounts of NaDT, and probed at cryogenic temperatures, showed HredH+ was converted to Hhyd. Over an increasing temperature range from 10 to 260 K catalytic turnover led to loss of Hhyd and appearance of Hox, consistent with enzymatic turnover and H2 formation. The results show for CaI that the μ-CO of [2Fe]H remains bridging for all of the "Hred" states and that HredH+ is on pathway to Hhyd and H2 evolution in the catalytic mechanism. These results provide a blueprint for designing small molecule catalytic analogs.

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Year:  2018        PMID: 29792026     DOI: 10.1021/jacs.8b03072

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  13 in total

Review 1.  Second and Outer Coordination Sphere Effects in Nitrogenase, Hydrogenase, Formate Dehydrogenase, and CO Dehydrogenase.

Authors:  Sven T Stripp; Benjamin R Duffus; Vincent Fourmond; Christophe Léger; Silke Leimkühler; Shun Hirota; Yilin Hu; Andrew Jasniewski; Hideaki Ogata; Markus W Ribbe
Journal:  Chem Rev       Date:  2022-07-18       Impact factor: 72.087

2.  Hydride state accumulation in native [FeFe]-hydrogenase with the physiological reductant H2 supports its catalytic relevance.

Authors:  Moritz Senger; Tobias Kernmayr; Marco Lorenzi; Holly J Redman; Gustav Berggren
Journal:  Chem Commun (Camb)       Date:  2022-06-23       Impact factor: 6.065

3.  Time-Resolved Infrared Spectroscopy Reveals the pH-Independence of the First Electron Transfer Step in the [FeFe] Hydrogenase Catalytic Cycle.

Authors:  Monica L K Sanchez; Seth Wiley; Edward Reijerse; Wolfgang Lubitz; James A Birrell; R Brian Dyer
Journal:  J Phys Chem Lett       Date:  2022-06-23       Impact factor: 6.888

4.  The roles of long-range proton-coupled electron transfer in the directionality and efficiency of [FeFe]-hydrogenases.

Authors:  Oliver Lampret; Jifu Duan; Eckhard Hofmann; Martin Winkler; Fraser A Armstrong; Thomas Happe
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-13       Impact factor: 11.205

5.  Energetics for Proton Reduction in FeFe Hydrogenase.

Authors:  Per E M Siegbahn; Rong-Zhen Liao
Journal:  J Phys Chem A       Date:  2020-12-04       Impact factor: 2.781

6.  Characterization of a putative sensory [FeFe]-hydrogenase provides new insight into the role of the active site architecture.

Authors:  Henrik Land; Alina Sekretareva; Ping Huang; Holly J Redman; Brigitta Németh; Nakia Polidori; Lívia S Mészáros; Moritz Senger; Sven T Stripp; Gustav Berggren
Journal:  Chem Sci       Date:  2020-09-21       Impact factor: 9.825

7.  Vibrational Perturbation of the [FeFe] Hydrogenase H-Cluster Revealed by 13C2H-ADT Labeling.

Authors:  Vladimir Pelmenschikov; James A Birrell; Leland B Gee; Casseday P Richers; Edward J Reijerse; Hongxin Wang; Simon Arragain; Nakul Mishra; Yoshitaka Yoda; Hiroaki Matsuura; Lei Li; Kenji Tamasaku; Thomas B Rauchfuss; Wolfgang Lubitz; Stephen P Cramer
Journal:  J Am Chem Soc       Date:  2021-05-27       Impact factor: 15.419

8.  Spectroscopic and biochemical insight into an electron-bifurcating [FeFe] hydrogenase.

Authors:  Nipa Chongdar; Krzysztof Pawlak; Olaf Rüdiger; Edward J Reijerse; Patricia Rodríguez-Maciá; Wolfgang Lubitz; James A Birrell; Hideaki Ogata
Journal:  J Biol Inorg Chem       Date:  2019-12-10       Impact factor: 3.358

9.  How [FeFe]-Hydrogenase Facilitates Bidirectional Proton Transfer.

Authors:  Moritz Senger; Viktor Eichmann; Konstantin Laun; Jifu Duan; Florian Wittkamp; Günther Knör; Ulf-Peter Apfel; Thomas Happe; Martin Winkler; Joachim Heberle; Sven Timo Stripp
Journal:  J Am Chem Soc       Date:  2019-10-15       Impact factor: 15.419

10.  Spectroscopic and Computational Evidence that [FeFe] Hydrogenases Operate Exclusively with CO-Bridged Intermediates.

Authors:  James A Birrell; Vladimir Pelmenschikov; Nakul Mishra; Hongxin Wang; Yoshitaka Yoda; Kenji Tamasaku; Thomas B Rauchfuss; Stephen P Cramer; Wolfgang Lubitz; Serena DeBeer
Journal:  J Am Chem Soc       Date:  2019-12-30       Impact factor: 15.419

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