Literature DB >> 32531101

Expanding the Genetic Code for Neuronal Studies.

Ivana Nikić-Spiegel1.   

Abstract

Genetic code expansion is one of the most powerful technologies in protein engineering. In addition to the 20 canonical amino acids, the expanded genetic code is supplemented by unnatural amino acids, which have artificial side chains that can be introduced into target proteins in vitro and in vivo. A wide range of chemical groups have been incorporated co-translationally into proteins in single cells and multicellular organisms by using genetic code expansion. Incorporated unnatural amino acids have been used for novel structure-function relationship studies, bioorthogonal labelling of proteins in cellulo for microscopy and in vivo for tissue-specific proteomics, the introduction of post-translational modifications and optical control of protein function, to name a few examples. In this Minireview, the development of genetic code expansion technology is briefly introduced, then its applications in neurobiology are discussed, with a focus on studies using mammalian cells and mice as model organisms.
© 2020 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA.

Entities:  

Keywords:  genetic code expansion; mutagenesis; neurobiology; protein engineering; unnatural amino acids

Mesh:

Substances:

Year:  2020        PMID: 32531101      PMCID: PMC7754302          DOI: 10.1002/cbic.202000300

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  159 in total

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Authors:  Hartmuth C. Kolb; M. G. Finn; K. Barry Sharpless
Journal:  Angew Chem Int Ed Engl       Date:  2001-06-01       Impact factor: 15.336

Review 2.  Unnatural amino acid mutagenesis in mapping ion channel function.

Authors:  Darren L Beene; Dennis A Dougherty; Henry A Lester
Journal:  Curr Opin Neurobiol       Date:  2003-06       Impact factor: 6.627

3.  Highly Stable trans-Cyclooctene Amino Acids for Live-Cell Labeling.

Authors:  Jan-Erik Hoffmann; Tilman Plass; Ivana Nikić; Iker Valle Aramburu; Christine Koehler; Hartmut Gillandt; Edward A Lemke; Carsten Schultz
Journal:  Chemistry       Date:  2015-07-15       Impact factor: 5.236

Review 4.  Azobenzene photoswitches for biomolecules.

Authors:  Andrew A Beharry; G Andrew Woolley
Journal:  Chem Soc Rev       Date:  2011-04-12       Impact factor: 54.564

5.  Virus-Enabled Optimization and Delivery of the Genetic Machinery for Efficient Unnatural Amino Acid Mutagenesis in Mammalian Cells and Tissues.

Authors:  Yunan Zheng; Tommy L Lewis; Peter Igo; Franck Polleux; Abhishek Chatterjee
Journal:  ACS Synth Biol       Date:  2016-08-09       Impact factor: 5.110

Review 6.  Biological Insight from Super-Resolution Microscopy: What We Can Learn from Localization-Based Images.

Authors:  David Baddeley; Joerg Bewersdorf
Journal:  Annu Rev Biochem       Date:  2017-12-22       Impact factor: 23.643

Review 7.  The pyrrolysine translational machinery as a genetic-code expansion tool.

Authors:  Tomasz Fekner; Michael K Chan
Journal:  Curr Opin Chem Biol       Date:  2011-04-19       Impact factor: 8.822

8.  Minimal tags for rapid dual-color live-cell labeling and super-resolution microscopy.

Authors:  Ivana Nikić; Tilman Plass; Oliver Schraidt; Jędrzej Szymański; John A G Briggs; Carsten Schultz; Edward A Lemke
Journal:  Angew Chem Int Ed Engl       Date:  2014-01-28       Impact factor: 15.336

Review 9.  Genetic Code Expansion and Optoproteomics.

Authors:  Yuting Chen; Linjie Lu; Shixin Ye
Journal:  Yale J Biol Med       Date:  2017-12-19

10.  Optocontrol of glutamate receptor activity by single side-chain photoisomerization.

Authors:  Viktoria Klippenstein; Christian Hoppmann; Shixin Ye; Lei Wang; Pierre Paoletti
Journal:  Elife       Date:  2017-05-23       Impact factor: 8.140

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  9 in total

Review 1.  Recent advancements in enzyme engineering via site-specific incorporation of unnatural amino acids.

Authors:  Hang-Qin Zhu; Xiao-Ling Tang; Ren-Chao Zheng; Yu-Guo Zheng
Journal:  World J Microbiol Biotechnol       Date:  2021-11-06       Impact factor: 3.312

2.  Minimal genetically encoded tags for fluorescent protein labeling in living neurons.

Authors:  Aleksandra Arsić; Cathleen Hagemann; Nevena Stajković; Timm Schubert; Ivana Nikić-Spiegel
Journal:  Nat Commun       Date:  2022-01-14       Impact factor: 14.919

3.  Bioorthogonal labeling of transmembrane proteins with non-canonical amino acids unveils masked epitopes in live neurons.

Authors:  Diogo Bessa-Neto; Gerti Beliu; Alexander Kuhlemann; Valeria Pecoraro; Sören Doose; Natacha Retailleau; Nicolas Chevrier; David Perrais; Markus Sauer; Daniel Choquet
Journal:  Nat Commun       Date:  2021-11-18       Impact factor: 14.919

4.  Genetic Code Expansion and Click-Chemistry Labeling to Visualize GABA-A Receptors by Super-Resolution Microscopy.

Authors:  Alexander Kuhlemann; Gerti Beliu; Dieter Janzen; Enrica Maria Petrini; Danush Taban; Dominic A Helmerich; Sören Doose; Martina Bruno; Andrea Barberis; Carmen Villmann; Markus Sauer; Christian Werner
Journal:  Front Synaptic Neurosci       Date:  2021-11-26

Review 5.  Undefining life's biochemistry: implications for abiogenesis.

Authors:  Stephen Freeland
Journal:  J R Soc Interface       Date:  2022-02-23       Impact factor: 4.118

Review 6.  Illuminating membrane structural dynamics of fusion and endocytosis with advanced light imaging techniques.

Authors:  Chung Yu Chan; Youssef Faragalla; Ling-Gang Wu
Journal:  Biochem Soc Trans       Date:  2022-08-31       Impact factor: 4.919

Review 7.  Expanding the chemical diversity of M13 bacteriophage.

Authors:  Grace L Allen; Ashley K Grahn; Katerina Kourentzi; Richard C Willson; Sean Waldrop; Jiantao Guo; Brian K Kay
Journal:  Front Microbiol       Date:  2022-08-08       Impact factor: 6.064

8.  Engineered Human Induced Pluripotent Cells Enable Genetic Code Expansion in Brain Organoids.

Authors:  Lea S van Husen; Anna-Maria Katsori; Birthe Meineke; Lars O Tjernberg; Sophia Schedin-Weiss; Simon J Elsässer
Journal:  Chembiochem       Date:  2021-09-13       Impact factor: 3.461

Review 9.  Expanding the Genetic Code for Neuronal Studies.

Authors:  Ivana Nikić-Spiegel
Journal:  Chembiochem       Date:  2020-07-20       Impact factor: 3.164

  9 in total

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