Literature DB >> 29272143

Biological Insight from Super-Resolution Microscopy: What We Can Learn from Localization-Based Images.

David Baddeley1,2, Joerg Bewersdorf1,3.   

Abstract

Super-resolution optical imaging based on the switching and localization of individual fluorescent molecules [photoactivated localization microscopy (PALM), stochastic optical reconstruction microscopy (STORM), etc.] has evolved remarkably over the last decade. Originally driven by pushing technological limits, it has become a tool of biological discovery. The initial demand for impressive pictures showing well-studied biological structures has been replaced by a need for quantitative, reliable data providing dependable evidence for specific unresolved biological hypotheses. In this review, we highlight applications that showcase this development, identify the features that led to their success, and discuss remaining challenges and difficulties. In this context, we consider the complex topic of defining resolution for this imaging modality and address some of the more common analytical methods used with this data.

Keywords:  PAINT; PALM; STORM; nanoscopy; quantitative analysis; single-molecule localization microscopy

Mesh:

Year:  2017        PMID: 29272143     DOI: 10.1146/annurev-biochem-060815-014801

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  45 in total

1.  Single-particle tracking photoactivated localization microscopy of membrane proteins in living plant tissues.

Authors:  Vincent Bayle; Jean-Bernard Fiche; Claire Burny; Matthieu Pierre Platre; Marcelo Nollmann; Alexandre Martinière; Yvon Jaillais
Journal:  Nat Protoc       Date:  2021-02-24       Impact factor: 13.491

2.  Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.

Authors:  Jeffrey Chang; Matthew G Romei; Steven G Boxer
Journal:  J Am Chem Soc       Date:  2019-09-24       Impact factor: 15.419

Review 3.  Visualizing, quantifying and manipulating mitochondrial DNA in vivo.

Authors:  David L Prole; Patrick F Chinnery; Nick S Jones
Journal:  J Biol Chem       Date:  2020-10-15       Impact factor: 5.157

Review 4.  The many faces of RNA-based RNase P, an RNA-world relic.

Authors:  Hong-Duc Phan; Lien B Lai; Walter J Zahurancik; Venkat Gopalan
Journal:  Trends Biochem Sci       Date:  2021-09-09       Impact factor: 13.807

5.  Single-Molecule Localization Microscopy of Subcellular Protein Distribution in Neurons.

Authors:  Jelmer Willems; Manon Westra; Harold D MacGillavry
Journal:  Methods Mol Biol       Date:  2022

Review 6.  Switchable Fluorophores for Single-Molecule Localization Microscopy.

Authors:  Honglin Li; Joshua C Vaughan
Journal:  Chem Rev       Date:  2018-09-17       Impact factor: 60.622

Review 7.  Super-resolution microscopy demystified.

Authors:  Lothar Schermelleh; Alexia Ferrand; Thomas Huser; Christian Eggeling; Markus Sauer; Oliver Biehlmaier; Gregor P C Drummen
Journal:  Nat Cell Biol       Date:  2019-01-02       Impact factor: 28.824

8.  Sample Preparation and Imaging Conditions Affect mEos3.2 Photophysics in Fission Yeast Cells.

Authors:  Mengyuan Sun; Kevin Hu; Joerg Bewersdorf; Thomas D Pollard
Journal:  Biophys J       Date:  2020-11-18       Impact factor: 4.033

9.  Single Molecules Are Your Quanta: A Bottom-Up Approach toward Multidimensional Super-resolution Microscopy.

Authors:  Limin Xiang; Kun Chen; Ke Xu
Journal:  ACS Nano       Date:  2021-07-26       Impact factor: 15.881

10.  Pupil function design for multifocal confocal, STED, and isoSTED microscopy.

Authors:  Dong-Ryoung Lee; Joerg Bewersdorf
Journal:  Appl Opt       Date:  2021-06-20       Impact factor: 1.980

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