Literature DB >> 21507706

The pyrrolysine translational machinery as a genetic-code expansion tool.

Tomasz Fekner1, Michael K Chan.   

Abstract

The discovery of pyrrolysine not only expanded the set of the known proteinogenic amino acids but also revealed unusual features of its encoding mechanism. The engagement of a canonical stop codon and a unique aminoacyl-tRNA synthetase-tRNA pair that can be used to accommodate a broad range of unnatural amino acids while maintaining strict orthogonality in a variety of prokaryotic and eukaryotic expression systems has proven an invaluable combination. Within a few years since its properties were elucidated, the pyrrolysine translational machinery has become a popular choice for the synthesis of recombinant proteins bearing a wide variety of otherwise hard-to-introduce functional groups. It is also central to the development of new synthetic strategies that rely on stop-codon suppression.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21507706      PMCID: PMC3487393          DOI: 10.1016/j.cbpa.2011.03.007

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  46 in total

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Authors:  Chang C Liu; Peter G Schultz
Journal:  Annu Rev Biochem       Date:  2010       Impact factor: 23.643

2.  A facile system for genetic incorporation of two different noncanonical amino acids into one protein in Escherichia coli.

Authors:  Wei Wan; Ying Huang; Zhiyong Wang; William K Russell; Pei-Jing Pai; David H Russell; Wenshe R Liu
Journal:  Angew Chem Int Ed Engl       Date:  2010-04-19       Impact factor: 15.336

3.  Encoding multiple unnatural amino acids via evolution of a quadruplet-decoding ribosome.

Authors:  Heinz Neumann; Kaihang Wang; Lloyd Davis; Maria Garcia-Alai; Jason W Chin
Journal:  Nature       Date:  2010-02-14       Impact factor: 49.962

4.  A method to site-specifically introduce methyllysine into proteins in E. coli.

Authors:  Hui-Wang Ai; Jae Wook Lee; Peter G Schultz
Journal:  Chem Commun (Camb)       Date:  2010-06-22       Impact factor: 6.222

5.  N6-(2-(R)-propargylglycyl)lysine as a clickable pyrrolysine mimic.

Authors:  Xin Li; Tomasz Fekner; Michael K Chan
Journal:  Chem Asian J       Date:  2010-08-02

6.  A genetically encoded epsilon-N-methyl lysine in mammalian cells.

Authors:  Dan Groff; Peng R Chen; Francis B Peters; Peter G Schultz
Journal:  Chembiochem       Date:  2010-05-17       Impact factor: 3.164

7.  A genetically encoded photocaged Nepsilon-methyl-L-lysine.

Authors:  Yane-Shih Wang; Bo Wu; Zhiyong Wang; Ying Huang; Wei Wan; William K Russell; Pei-Jing Pai; Yin N Moe; David H Russell; Wenshe R Liu
Journal:  Mol Biosyst       Date:  2010-03-30

Review 8.  Selenocysteine, pyrrolysine, and the unique energy metabolism of methanogenic archaea.

Authors:  Michael Rother; Joseph A Krzycki
Journal:  Archaea       Date:  2010-08-17       Impact factor: 3.273

9.  Genetically encoded photocontrol of protein localization in mammalian cells.

Authors:  Arnaud Gautier; Duy P Nguyen; Hrvoje Lusic; Wenlin An; Alexander Deiters; Jason W Chin
Journal:  J Am Chem Soc       Date:  2010-03-31       Impact factor: 15.419

10.  High content of proteins containing 21st and 22nd amino acids, selenocysteine and pyrrolysine, in a symbiotic deltaproteobacterium of gutless worm Olavius algarvensis.

Authors:  Yan Zhang; Vadim N Gladyshev
Journal:  Nucleic Acids Res       Date:  2007-07-11       Impact factor: 16.971

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  10 in total

Review 1.  Repurposing the translation apparatus for synthetic biology.

Authors:  Benjamin J Des Soye; Jaymin R Patel; Farren J Isaacs; Michael C Jewett
Journal:  Curr Opin Chem Biol       Date:  2015-07-15       Impact factor: 8.822

2.  Chemically tunable mucin chimeras assembled on living cells.

Authors:  Jessica R Kramer; Bibiana Onoa; Carlos Bustamante; Carolyn R Bertozzi
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-29       Impact factor: 11.205

3.  An efficient cell-free protein synthesis platform for producing proteins with pyrrolysine-based noncanonical amino acids.

Authors:  Arnaz Ranji Charna; Benjamin J Des Soye; Ioanni Ntai; Neil L Kelleher; Michael C Jewett
Journal:  Biotechnol J       Date:  2022-06-09       Impact factor: 5.726

4.  PylSn and the homologous N-terminal domain of pyrrolysyl-tRNA synthetase bind the tRNA that is essential for the genetic encoding of pyrrolysine.

Authors:  Ruisheng Jiang; Joseph A Krzycki
Journal:  J Biol Chem       Date:  2012-07-31       Impact factor: 5.157

5.  Synthesis of non-linear protein dimers through a genetically encoded Thiol-ene reaction.

Authors:  Jessica Torres-Kolbus; Chungjung Chou; Jihe Liu; Alexander Deiters
Journal:  PLoS One       Date:  2014-09-02       Impact factor: 3.240

6.  Towards Biocontained Cell Factories: An Evolutionarily Adapted Escherichia coli Strain Produces a New-to-nature Bioactive Lantibiotic Containing Thienopyrrole-Alanine.

Authors:  Anja Kuthning; Patrick Durkin; Stefan Oehm; Michael G Hoesl; Nediljko Budisa; Roderich D Süssmuth
Journal:  Sci Rep       Date:  2016-09-16       Impact factor: 4.379

7.  Expanding the genetic code of Salmonella with non-canonical amino acids.

Authors:  Qinglei Gan; Brent P Lehman; Thomas A Bobik; Chenguang Fan
Journal:  Sci Rep       Date:  2016-12-23       Impact factor: 4.379

Review 8.  Future of the Genetic Code.

Authors:  Hong Xue; J Tze-Fei Wong
Journal:  Life (Basel)       Date:  2017-02-28

9.  PEGylation and Dimerization of Expressed Proteins under Near Equimolar Conditions with Potassium 2-Pyridyl Acyltrifluoroborates.

Authors:  Christopher J White; Jeffrey W Bode
Journal:  ACS Cent Sci       Date:  2018-01-05       Impact factor: 14.553

Review 10.  Expanding the Genetic Code for Neuronal Studies.

Authors:  Ivana Nikić-Spiegel
Journal:  Chembiochem       Date:  2020-07-20       Impact factor: 3.164

  10 in total

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