Literature DB >> 32424271

Elasticizing tissues for reversible shape transformation and accelerated molecular labeling.

Taeyun Ku1,2,3, Webster Guan4, Nicholas B Evans1,2, Chang Ho Sohn1,2, Alexandre Albanese1, Joon-Goon Kim5, Matthew P Frosch6, Kwanghun Chung7,8,9,10,11,12,13.   

Abstract

We developed entangled link-augmented stretchable tissue-hydrogel (ELAST), a technology that transforms tissues into elastic hydrogels to enhance macromolecular accessibility and mechanical stability simultaneously. ELASTicized tissues are highly stretchable and compressible, which enables reversible shape transformation and faster delivery of probes into intact tissue specimens via mechanical thinning. This universal platform may facilitate rapid and scalable molecular phenotyping of large-scale biological systems, such as human organs.

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Year:  2020        PMID: 32424271      PMCID: PMC8056749          DOI: 10.1038/s41592-020-0823-y

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  21 in total

1.  Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain.

Authors:  Hiroshi Hama; Hiroshi Kurokawa; Hiroyuki Kawano; Ryoko Ando; Tomomi Shimogori; Hisayori Noda; Kiyoko Fukami; Asako Sakaue-Sawano; Atsushi Miyawaki
Journal:  Nat Neurosci       Date:  2011-08-30       Impact factor: 24.884

Review 2.  Advances in engineering hydrogels.

Authors:  Yu Shrike Zhang; Ali Khademhosseini
Journal:  Science       Date:  2017-05-05       Impact factor: 47.728

3.  Shrinkage-mediated imaging of entire organs and organisms using uDISCO.

Authors:  Chenchen Pan; Ruiyao Cai; Francesca Paola Quacquarelli; Alireza Ghasemigharagoz; Athanasios Lourbopoulos; Paweł Matryba; Nikolaus Plesnila; Martin Dichgans; Farida Hellal; Ali Ertürk
Journal:  Nat Methods       Date:  2016-08-22       Impact factor: 28.547

4.  Quantifying the impact of molecular defects on polymer network elasticity.

Authors:  Mingjiang Zhong; Rui Wang; Ken Kawamoto; Bradley D Olsen; Jeremiah A Johnson
Journal:  Science       Date:  2016-09-16       Impact factor: 47.728

5.  Optical imaging. Expansion microscopy.

Authors:  Fei Chen; Paul W Tillberg; Edward S Boyden
Journal:  Science       Date:  2015-01-15       Impact factor: 47.728

6.  Whole-Body Profiling of Cancer Metastasis with Single-Cell Resolution.

Authors:  Shimpei I Kubota; Kei Takahashi; Jun Nishida; Yasuyuki Morishita; Shogo Ehata; Kazuki Tainaka; Kohei Miyazono; Hiroki R Ueda
Journal:  Cell Rep       Date:  2017-07-05       Impact factor: 9.423

Review 7.  Tissue clearing and its applications in neuroscience.

Authors:  Hiroki R Ueda; Ali Ertürk; Kwanghun Chung; Viviana Gradinaru; Alain Chédotal; Pavel Tomancak; Philipp J Keller
Journal:  Nat Rev Neurosci       Date:  2020-02       Impact factor: 34.870

8.  MeCP2-regulated miRNAs control early human neurogenesis through differential effects on ERK and AKT signaling.

Authors:  N Mellios; D A Feldman; S D Sheridan; J P K Ip; S Kwok; S K Amoah; B Rosen; B A Rodriguez; B Crawford; R Swaminathan; S Chou; Y Li; M Ziats; C Ernst; R Jaenisch; S J Haggarty; M Sur
Journal:  Mol Psychiatry       Date:  2017-04-25       Impact factor: 15.992

9.  Scalable and Isotropic Expansion of Tissues with Simply Tunable Expansion Ratio.

Authors:  Han-Eol Park; Dongkil Choi; Ji Su Park; Changgon Sim; Sohyun Park; Sunah Kang; Hyunsoo Yim; Myungsun Lee; Jaeyoun Kim; Jinyoung Pac; Kunsoo Rhee; Junho Lee; Yunjong Lee; Yan Lee; Sung-Yon Kim
Journal:  Adv Sci (Weinh)       Date:  2019-09-30       Impact factor: 16.806

10.  Nanoscale imaging of RNA with expansion microscopy.

Authors:  Fei Chen; Asmamaw T Wassie; Allison J Cote; Anubhav Sinha; Shahar Alon; Shoh Asano; Evan R Daugharthy; Jae-Byum Chang; Adam Marblestone; George M Church; Arjun Raj; Edward S Boyden
Journal:  Nat Methods       Date:  2016-07-04       Impact factor: 28.547

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  17 in total

1.  TISSUE CLEARING.

Authors:  Douglas S Richardson; Webster Guan; Katsuhiko Matsumoto; Chenchen Pan; Kwanghun Chung; Ali Ertürk; Hiroki R Ueda; Jeff W Lichtman
Journal:  Nat Rev Methods Primers       Date:  2021-12-16

Review 2.  Scalable tissue labeling and clearing of intact human organs.

Authors:  Hongcheng Mai; Zhouyi Rong; Shan Zhao; Ruiyao Cai; Hanno Steinke; Ingo Bechmann; Ali Ertürk
Journal:  Nat Protoc       Date:  2022-07-20       Impact factor: 17.021

Review 3.  Multispectral confocal 3D imaging of intact healthy and tumor tissue using mLSR-3D.

Authors:  Ravian L van Ineveld; Raphaël Collot; Mario Barrera Román; Anna Pagliaro; Nils Bessler; Hendrikus C R Ariese; Michiel Kleinnijenhuis; Marcel Kool; Maria Alieva; Susana M Chuva de Sousa Lopes; Ellen J Wehrens; Anne C Rios
Journal:  Nat Protoc       Date:  2022-09-30       Impact factor: 17.021

Review 4.  Nanoscale fluorescence imaging of biological ultrastructure via molecular anchoring and physical expansion.

Authors:  Wei Wang; Yat Ho Chan; SoYoung Kwon; Jamuna Tandukar; Ruixuan Gao
Journal:  Nano Converg       Date:  2022-07-09

5.  A simple optical tissue clearing pipeline for 3D vasculature imaging of the mediastinal organs in mice.

Authors:  Quanchao Sun; Picascia Tiziana; Arif Ul Maula Khan; Vincent Heuveline; Norbert Gretz
Journal:  Int J Exp Pathol       Date:  2021-10-06       Impact factor: 2.793

Review 6.  3D imaging for driving cancer discovery.

Authors:  Ravian L van Ineveld; Esmée J van Vliet; Ellen J Wehrens; Maria Alieva; Anne C Rios
Journal:  EMBO J       Date:  2022-04-11       Impact factor: 14.012

7.  Large-scale, cell-resolution volumetric mapping allows layer-specific investigation of human brain cytoarchitecture.

Authors:  Irene Costantini; Giacomo Mazzamuto; Matteo Roffilli; Annunziatina Laurino; Filippo Maria Castelli; Mattia Neri; Giovanni Lughi; Andrea Simonetto; Erica Lazzeri; Luca Pesce; Christophe Destrieux; Ludovico Silvestri; Valerio Conti; Renzo Guerrini; Francesco Saverio Pavone
Journal:  Biomed Opt Express       Date:  2021-05-27       Impact factor: 3.732

8.  Enhancing cardiovascular research with whole-organ imaging.

Authors:  Pamela E Rios Coronado; Kristy Red-Horse
Journal:  Curr Opin Hematol       Date:  2021-05-01       Impact factor: 3.218

Review 9.  Fluorescent labeling of abundant reactive entities (FLARE) for cleared-tissue and super-resolution microscopy.

Authors:  Min Yen Lee; Chenyi Mao; Adam K Glaser; Marcus A Woodworth; Aaron R Halpern; Adilijiang Ali; Jonathan T C Liu; Joshua C Vaughan
Journal:  Nat Protoc       Date:  2022-02-02       Impact factor: 17.021

Review 10.  Basic principles of hydrogel-based tissue transformation technologies and their applications.

Authors:  Seo Woo Choi; Webster Guan; Kwanghun Chung
Journal:  Cell       Date:  2021-08-05       Impact factor: 66.850

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