Literature DB >> 25592419

Optical imaging. Expansion microscopy.

Fei Chen1, Paul W Tillberg2, Edward S Boyden3.   

Abstract

In optical microscopy, fine structural details are resolved by using refraction to magnify images of a specimen. We discovered that by synthesizing a swellable polymer network within a specimen, it can be physically expanded, resulting in physical magnification. By covalently anchoring specific labels located within the specimen directly to the polymer network, labels spaced closer than the optical diffraction limit can be isotropically separated and optically resolved, a process we call expansion microscopy (ExM). Thus, this process can be used to perform scalable superresolution microscopy with diffraction-limited microscopes. We demonstrate ExM with apparent ~70-nanometer lateral resolution in both cultured cells and brain tissue, performing three-color superresolution imaging of ~10(7) cubic micrometers of the mouse hippocampus with a conventional confocal microscope.
Copyright © 2015, American Association for the Advancement of Science.

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Year:  2015        PMID: 25592419      PMCID: PMC4312537          DOI: 10.1126/science.1260088

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  21 in total

1.  Optical sectioning deep inside live embryos by selective plane illumination microscopy.

Authors:  Jan Huisken; Jim Swoger; Filippo Del Bene; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Science       Date:  2004-08-13       Impact factor: 47.728

Review 2.  Cell- and lamina-specific expression and activity-dependent regulation of type II calcium/calmodulin-dependent protein kinase isoforms in monkey visual cortex.

Authors:  B Tighilet; T Hashikawa; E G Jones
Journal:  J Neurosci       Date:  1998-03-15       Impact factor: 6.167

3.  Synapse-specific localization of NMDA and GABA(A) receptor subunits revealed by antigen-retrieval immunohistochemistry.

Authors:  J M Fritschy; O Weinmann; A Wenzel; D Benke
Journal:  J Comp Neurol       Date:  1998-01-12       Impact factor: 3.215

4.  Immunocytochemical localization of choline acetyltransferase in rat cerebral cortex: a study of cholinergic neurons and synapses.

Authors:  C R Houser; G D Crawford; P M Salvaterra; J E Vaughn
Journal:  J Comp Neurol       Date:  1985-04-01       Impact factor: 3.215

5.  A simple post-embedding system for the rapid demonstration of tissue antigens under the electron microscope.

Authors:  G R Newman; B Jasani; E D Williams
Journal:  Histochem J       Date:  1983-06

6.  Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution.

Authors:  Bi-Chang Chen; Wesley R Legant; Kai Wang; Lin Shao; Daniel E Milkie; Michael W Davidson; Chris Janetopoulos; Xufeng S Wu; John A Hammer; Zhe Liu; Brian P English; Yuko Mimori-Kiyosue; Daniel P Romero; Alex T Ritter; Jennifer Lippincott-Schwartz; Lillian Fritz-Laylin; R Dyche Mullins; Diana M Mitchell; Joshua N Bembenek; Anne-Cecile Reymann; Ralph Böhme; Stephan W Grill; Jennifer T Wang; Geraldine Seydoux; U Serdar Tulu; Daniel P Kiehart; Eric Betzig
Journal:  Science       Date:  2014-10-23       Impact factor: 47.728

7.  Globally optimal stitching of tiled 3D microscopic image acquisitions.

Authors:  Stephan Preibisch; Stephan Saalfeld; Pavel Tomancak
Journal:  Bioinformatics       Date:  2009-04-03       Impact factor: 6.937

8.  Lamin proteins form an internal nucleoskeleton as well as a peripheral lamina in human cells.

Authors:  P Hozák; A M Sasseville; Y Raymond; P R Cook
Journal:  J Cell Sci       Date:  1995-02       Impact factor: 5.285

9.  Whole-cell 3D STORM reveals interactions between cellular structures with nanometer-scale resolution.

Authors:  Bo Huang; Sara A Jones; Boerries Brandenburg; Xiaowei Zhuang
Journal:  Nat Methods       Date:  2008-11-23       Impact factor: 28.547

10.  Resolution doubling in 3D-STORM imaging through improved buffers.

Authors:  Nicolas Olivier; Debora Keller; Pierre Gönczy; Suliana Manley
Journal:  PLoS One       Date:  2013-07-17       Impact factor: 3.240

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  348 in total

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Authors:  Sung-Yon Kim; Jae Hun Cho; Evan Murray; Naveed Bakh; Heejin Choi; Kimberly Ohn; Luzdary Ruelas; Austin Hubbert; Meg McCue; Sara L Vassallo; Philipp J Keller; Kwanghun Chung
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-02       Impact factor: 11.205

2.  Optogenetics and the future of neuroscience.

Authors:  Edward S Boyden
Journal:  Nat Neurosci       Date:  2015-09       Impact factor: 24.884

3.  Whole-body tissue stabilization and selective extractions via tissue-hydrogel hybrids for high-resolution intact circuit mapping and phenotyping.

Authors:  Ken Y Chan; Nicholas C Flytzanis; Bin Yang; Jennifer B Treweek; Benjamin E Deverman; Alon Greenbaum; Antti Lignell; Cheng Xiao; Long Cai; Mark S Ladinsky; Pamela J Bjorkman; Charless C Fowlkes; Viviana Gradinaru
Journal:  Nat Protoc       Date:  2015-10-22       Impact factor: 13.491

4.  Advancing multiscale structural mapping of the brain through fluorescence imaging and analysis across length scales.

Authors:  L J Hogstrom; S M Guo; K Murugadoss; M Bathe
Journal:  Interface Focus       Date:  2016-02-06       Impact factor: 3.906

Review 5.  Extracting structural and functional features of widely distributed biological circuits with single cell resolution via tissue clearing and delivery vectors.

Authors:  Jennifer Brooke Treweek; Viviana Gradinaru
Journal:  Curr Opin Biotechnol       Date:  2016-07-06       Impact factor: 9.740

6.  Basics of Expansion Microscopy.

Authors:  Aleksandra Klimas; Brendan Gallagher; Yongxin Zhao
Journal:  Curr Protoc Cytom       Date:  2019-12

7.  3D mapping and accelerated super-resolution imaging of the human genome using in situ sequencing.

Authors:  Huy Q Nguyen; Shyamtanu Chattoraj; David Castillo; Son C Nguyen; Guy Nir; Antonios Lioutas; Elliot A Hershberg; Nuno M C Martins; Paul L Reginato; Mohammed Hannan; Brian J Beliveau; George M Church; Evan R Daugharthy; Marc A Marti-Renom; C-Ting Wu
Journal:  Nat Methods       Date:  2020-07-27       Impact factor: 28.547

8.  Expansion microscopy of C. elegans.

Authors:  Chih-Chieh Jay Yu; Nicholas C Barry; Asmamaw T Wassie; Anubhav Sinha; Abhishek Bhattacharya; Shoh Asano; Chi Zhang; Fei Chen; Oliver Hobert; Miriam B Goodman; Gal Haspel; Edward S Boyden
Journal:  Elife       Date:  2020-05-01       Impact factor: 8.140

9.  Three-Dimensional Analysis of the Human Pancreas.

Authors:  Jonas L Fowler; Steve Seung-Young Lee; Zachary C Wesner; Scott K Olehnik; Stephen J Kron; Manami Hara
Journal:  Endocrinology       Date:  2018-03-01       Impact factor: 4.736

10.  Expansion Microscopy: Protocols for Imaging Proteins and RNA in Cells and Tissues.

Authors:  Shoh M Asano; Ruixuan Gao; Asmamaw T Wassie; Paul W Tillberg; Fei Chen; Edward S Boyden
Journal:  Curr Protoc Cell Biol       Date:  2018-08-02
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