Literature DB >> 35650376

Classification of Parkinson's disease using a region-of-interest- and resting-state functional magnetic resonance imaging-based radiomics approach.

Dafa Shi1, Xiang Yao1, Yanfei Li1, Haoran Zhang1, Guangsong Wang1, Siyuan Wang1, Ke Ren2.   

Abstract

To investigate the value of combining amplitude of low-frequency fluctuations-based radiomics and the support vector machine classifier method in distinguishing patients with Parkinson's disease from healthy controls. A total of 123 patients with Parkinson's disease and 90 healthy controls from three centers with functional and structural MRI images were included in this study. We extracted radiomics features using the Brainnetome 246 atlas from the mean amplitude of low-frequency fluctuations maps. Two-sample t-tests and recursive feature elimination combined with support vector machine method were applied for feature selection and dimensionality reduction. We used support vector machine classifier to construct model and identify the discriminative features. The automated anatomical labeling 90 atlas and fivefold cross-validation were used to evaluate the robustness and generalization of the classifier. We found our model obtained a high classification performance with an accuracy of 78.07%, and AUC, sensitivity, and specificity of 0.8597, 78.80%, and 76.08%, respectively. We detected 7 discriminative brain subregions. The fivefold cross-validation and automated anatomical labeling 90 atlas also got high classification accuracy, and we found Brainnetome 246 atlas achieved a higher classification performance than the automated anatomical labeling 90 atlas both with tenfold and fivefold cross-validation. Our findings may help the early diagnosis of Parkinson's disease and provide support for research on Parkinson's disease mechanisms and clinical evaluation.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Machine learning; Parkinson’s disease; Radiomics; Recursive feature elimination; Support vector machine

Mesh:

Year:  2022        PMID: 35650376     DOI: 10.1007/s11682-022-00685-y

Source DB:  PubMed          Journal:  Brain Imaging Behav        ISSN: 1931-7557            Impact factor:   3.224


  68 in total

Review 1.  Resting-state functional MR imaging: a new window to the brain.

Authors:  Frederik Barkhof; Sven Haller; Serge A R B Rombouts
Journal:  Radiology       Date:  2014-07       Impact factor: 11.105

2.  Functional and structural changes in gray matter of parkinson's disease patients with mild cognitive impairment.

Authors:  Boyu Chen; Shanshan Wang; Wenge Sun; Xiuli Shang; Hu Liu; Guohao Liu; Jie Gao; Guoguang Fan
Journal:  Eur J Radiol       Date:  2017-05-21       Impact factor: 3.528

3.  Clinical and Dopamine Transporter Imaging Trajectories in a Cohort of Parkinson's Disease Patients with GBA Mutations.

Authors:  Silvia Paola Caminiti; Giulia Carli; Micol Avenali; Fabio Blandini; Daniela Perani
Journal:  Mov Disord       Date:  2021-10-01       Impact factor: 10.338

4.  Detecting brain structural changes as biomarker from magnetic resonance images using a local feature based SVM approach.

Authors:  Ye Chen; Judd Storrs; Lirong Tan; Lawrence J Mazlack; Jing-Huei Lee; Long J Lu
Journal:  J Neurosci Methods       Date:  2013-09-14       Impact factor: 2.390

5.  Joint feature-sample selection and robust diagnosis of Parkinson's disease from MRI data.

Authors:  Ehsan Adeli; Feng Shi; Le An; Chong-Yaw Wee; Guorong Wu; Tao Wang; Dinggang Shen
Journal:  Neuroimage       Date:  2016-06-10       Impact factor: 6.556

6.  Topological analyses of functional connectomics: A crucial role of global signal removal, brain parcellation, and null models.

Authors:  Xiaodan Chen; Xuhong Liao; Zhengjia Dai; Qixiang Lin; Zhiqun Wang; Kuncheng Li; Yong He
Journal:  Hum Brain Mapp       Date:  2018-07-12       Impact factor: 5.038

7.  Exploring the reproducibility of functional connectivity alterations in Parkinson's disease.

Authors:  Liviu Badea; Mihaela Onu; Tao Wu; Adina Roceanu; Ovidiu Bajenaru
Journal:  PLoS One       Date:  2017-11-28       Impact factor: 3.240

8.  The impact of T1 versus EPI spatial normalization templates for fMRI data analyses.

Authors:  Vince D Calhoun; Tor D Wager; Anjali Krishnan; Keri S Rosch; Karen E Seymour; Mary Beth Nebel; Stewart H Mostofsky; Prashanth Nyalakanai; Kent Kiehl
Journal:  Hum Brain Mapp       Date:  2017-07-26       Impact factor: 5.038

9.  Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach.

Authors:  Hugo J W L Aerts; Emmanuel Rios Velazquez; Ralph T H Leijenaar; Chintan Parmar; Patrick Grossmann; Sara Carvalho; Sara Cavalho; Johan Bussink; René Monshouwer; Benjamin Haibe-Kains; Derek Rietveld; Frank Hoebers; Michelle M Rietbergen; C René Leemans; Andre Dekker; John Quackenbush; Robert J Gillies; Philippe Lambin
Journal:  Nat Commun       Date:  2014-06-03       Impact factor: 14.919

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