Literature DB >> 32220295

Regulation of pluripotency and reprogramming by RNA binding proteins.

Dan Li1, Mohamed S Kishta2, Jianlong Wang3.   

Abstract

Embryonic stem cells have the capacities of self-renewal and pluripotency. Pluripotency establishment (somatic cell reprogramming), maintenance, and execution (differentiation) require orchestrated regulatory mechanisms of a cell's molecular machinery, including signaling pathways, epigenetics, transcription, translation, and protein degradation. RNA binding proteins (RBPs) take part in every process of RNA regulation and recent studies began to address their important functions in the regulation of pluripotency and reprogramming. Here, we discuss the roles of RBPs in key regulatory steps in the control of pluripotency and reprogramming. Among RNA binding proteins are a group of RNA helicases that are responsible for RNA structure remodeling with important functional implications. We highlight the largest family of RNA helicases, DDX (DEAD-box) helicase family and our current understanding of their functions specifically in the regulation of pluripotency and reprogramming.
© 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  DDX helicases; Embryonic stem cells; Pluripotency; RNA binding proteins; Reprogramming

Mesh:

Substances:

Year:  2020        PMID: 32220295      PMCID: PMC8015705          DOI: 10.1016/bs.ctdb.2020.01.003

Source DB:  PubMed          Journal:  Curr Top Dev Biol        ISSN: 0070-2153            Impact factor:   4.897


  122 in total

Review 1.  SF1 and SF2 helicases: family matters.

Authors:  Margaret E Fairman-Williams; Ulf-Peter Guenther; Eckhard Jankowsky
Journal:  Curr Opin Struct Biol       Date:  2010-04-22       Impact factor: 6.809

Review 2.  RNA helicases at work: binding and rearranging.

Authors:  Eckhard Jankowsky
Journal:  Trends Biochem Sci       Date:  2011-01       Impact factor: 13.807

Review 3.  Mechanisms of gene regulation in human embryos and pluripotent stem cells.

Authors:  Thorold W Theunissen; Rudolf Jaenisch
Journal:  Development       Date:  2017-12-15       Impact factor: 6.868

4.  RNA-binding proteins in pluripotency, differentiation, and reprogramming.

Authors:  Diana Guallar; Jianlong Wang
Journal:  Front Biol (Beijing)       Date:  2014-10

5.  DDX6 Orchestrates Mammalian Progenitor Function through the mRNA Degradation and Translation Pathways.

Authors:  Ying Wang; Marc Arribas-Layton; Yifang Chen; Jens Lykke-Andersen; George L Sen
Journal:  Mol Cell       Date:  2015-09-24       Impact factor: 17.970

6.  Origin and formation of the first two distinct cell types of the inner cell mass in the mouse embryo.

Authors:  Samantha A Morris; Roy T Y Teo; Huiliang Li; Paul Robson; David M Glover; Magdalena Zernicka-Goetz
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-22       Impact factor: 11.205

Review 7.  Evidence for and against Liquid-Liquid Phase Separation in the Nucleus.

Authors:  Peng A; Stephanie C Weber
Journal:  Noncoding RNA       Date:  2019-11-01

8.  Altered A-to-I RNA editing in human embryogenesis.

Authors:  Ronit Shtrichman; Igal Germanguz; Rachel Mandel; Anna Ziskind; Irit Nahor; Michal Safran; Sivan Osenberg; Ofra Sherf; Gideon Rechavi; Joseph Itskovitz-Eldor
Journal:  PLoS One       Date:  2012-07-31       Impact factor: 3.240

9.  Reprogramming of 3' untranslated regions of mRNAs by alternative polyadenylation in generation of pluripotent stem cells from different cell types.

Authors:  Zhe Ji; Bin Tian
Journal:  PLoS One       Date:  2009-12-23       Impact factor: 3.240

10.  Derivation of pluripotent epiblast stem cells from mammalian embryos.

Authors:  I Gabrielle M Brons; Lucy E Smithers; Matthew W B Trotter; Peter Rugg-Gunn; Bowen Sun; Susana M Chuva de Sousa Lopes; Sarah K Howlett; Amanda Clarkson; Lars Ahrlund-Richter; Roger A Pedersen; Ludovic Vallier
Journal:  Nature       Date:  2007-06-27       Impact factor: 49.962

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  2 in total

1.  eIF4A2 targets developmental potency and histone H3.3 transcripts for translational control of stem cell pluripotency.

Authors:  Dan Li; Jihong Yang; Xin Huang; Hongwei Zhou; Jianlong Wang
Journal:  Sci Adv       Date:  2022-03-30       Impact factor: 14.136

2.  RBM47 is a Critical Regulator of Mouse Embryonic Stem Cell Differentiation.

Authors:  Pavan Kumar Mysuru Shivalingappa; Divya Kumari Singh; Vaishali Sharma; Vivek Arora; Anjali Shiras; Sharmila A Bapat
Journal:  Stem Cell Rev Rep       Date:  2022-08-20       Impact factor: 6.692

  2 in total

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