Literature DB >> 26412305

DDX6 Orchestrates Mammalian Progenitor Function through the mRNA Degradation and Translation Pathways.

Ying Wang1, Marc Arribas-Layton2, Yifang Chen1, Jens Lykke-Andersen2, George L Sen3.   

Abstract

In adult tissues, stem and progenitor cells must balance proliferation and differentiation to maintain homeostasis. How this is done is unclear. Here, we show that the DEAD box RNA helicase, DDX6 is necessary for maintaining adult progenitor cell function. DDX6 loss results in premature differentiation and decreased proliferation of epidermal progenitor cells. To maintain self-renewal, DDX6 associates with YBX1 to bind the stem loops found in the 3' UTRs of regulators of proliferation/self-renewal (CDK1, EZH2) and recruit them to EIF4E to facilitate their translation. To prevent premature differentiation of progenitor cells, DDX6 regulates the 5' UTR of differentiation inducing transcription factor, KLF4 and degrades its transcripts through association with mRNA degradation proteins. Our results demonstrate that progenitor function is maintained by DDX6 complexes through two distinct pathways that include the degradation of differentiation-inducing transcripts and by promoting the translation of self-renewal and proliferation mRNAs.
Copyright © 2015 Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26412305      PMCID: PMC4592480          DOI: 10.1016/j.molcel.2015.08.014

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  41 in total

1.  Control of differentiation in a self-renewing mammalian tissue by the histone demethylase JMJD3.

Authors:  George L Sen; Daniel E Webster; Deborah I Barragan; Howard Y Chang; Paul A Khavari
Journal:  Genes Dev       Date:  2008-07-15       Impact factor: 11.361

2.  ZNF750 is a p63 target gene that induces KLF4 to drive terminal epidermal differentiation.

Authors:  George L Sen; Lisa D Boxer; Dan E Webster; Rose T Bussat; Kun Qu; Brian J Zarnegar; Danielle Johnston; Zurab Siprashvili; Paul A Khavari
Journal:  Dev Cell       Date:  2012-02-23       Impact factor: 12.270

3.  Oct4 interaction with Hmgb2 regulates Akt signaling and pluripotency.

Authors:  Pearl A Campbell; Michael A Rudnicki
Journal:  Stem Cells       Date:  2013-06       Impact factor: 6.277

4.  AU-rich-element-dependent translation repression requires the cooperation of tristetraprolin and RCK/P54.

Authors:  Mei-Yan Qi; Zhi-Zhang Wang; Zhuo Zhang; Qin Shao; An Zeng; Xiang-Qi Li; Wen-Qing Li; Chen Wang; Fu-Ju Tian; Qing Li; Jun Zou; Yong-Wen Qin; Gary Brewer; Shuang Huang; Qing Jing
Journal:  Mol Cell Biol       Date:  2011-12-27       Impact factor: 4.272

5.  A homolog of Drosophila grainy head is essential for epidermal integrity in mice.

Authors:  Stephen B Ting; Jacinta Caddy; Nikki Hislop; Tomasz Wilanowski; Alana Auden; Lin-Lin Zhao; Sarah Ellis; Pritinder Kaur; Yoshikazu Uchida; Walter M Holleran; Peter M Elias; John M Cunningham; Stephen M Jane
Journal:  Science       Date:  2005-04-15       Impact factor: 47.728

6.  Phosphorylation dynamics during early differentiation of human embryonic stem cells.

Authors:  Dennis Van Hoof; Javier Muñoz; Stefan R Braam; Martijn W H Pinkse; Rune Linding; Albert J R Heck; Christine L Mummery; Jeroen Krijgsveld
Journal:  Cell Stem Cell       Date:  2009-08-07       Impact factor: 24.633

7.  Targeted mRNA degradation by deadenylation-independent decapping.

Authors:  Gwenael Badis; Cosmin Saveanu; Micheline Fromont-Racine; Alain Jacquier
Journal:  Mol Cell       Date:  2004-07-02       Impact factor: 17.970

8.  Ezh2 orchestrates gene expression for the stepwise differentiation of tissue-specific stem cells.

Authors:  Elena Ezhkova; H Amalia Pasolli; Joel S Parker; Nicole Stokes; I-hsin Su; Gregory Hannon; Alexander Tarakhovsky; Elaine Fuchs
Journal:  Cell       Date:  2009-03-20       Impact factor: 41.582

9.  Transcriptional profiling of SNAI2 regulated genes in primary human keratinocytes.

Authors:  Devendra S Mistry; Yifang Chen; Ying Wang; George L Sen
Journal:  Genom Data       Date:  2015-06-01

10.  Cotranscriptional recruitment of the nuclear poly(A)-binding protein Pab2 to nascent transcripts and association with translating mRNPs.

Authors:  Caroline Lemieux; François Bachand
Journal:  Nucleic Acids Res       Date:  2009-03-31       Impact factor: 16.971

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  45 in total

1.  MTSS1/Src family kinase dysregulation underlies multiple inherited ataxias.

Authors:  Alexander S Brown; Pratap Meera; Banu Altindag; Ravi Chopra; Emma M Perkins; Sharan Paul; Daniel R Scoles; Eric Tarapore; Jessica Magri; Haoran Huang; Mandy Jackson; Vikram G Shakkottai; Thomas S Otis; Stefan M Pulst; Scott X Atwood; Anthony E Oro
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-07       Impact factor: 11.205

2.  The Cohesin Complex Is Necessary for Epidermal Progenitor Cell Function through Maintenance of Self-Renewal Genes.

Authors:  Maria Noutsou; Jingting Li; Ji Ling; Jackson Jones; Ying Wang; Yifang Chen; George L Sen
Journal:  Cell Rep       Date:  2017-09-26       Impact factor: 9.423

Review 3.  Emerging connections between RNA and autophagy.

Authors:  Lisa B Frankel; Michal Lubas; Anders H Lund
Journal:  Autophagy       Date:  2016-10-07       Impact factor: 16.016

Review 4.  The multiple functions of RNA helicases as drivers and regulators of gene expression.

Authors:  Cyril F Bourgeois; Franck Mortreux; Didier Auboeuf
Journal:  Nat Rev Mol Cell Biol       Date:  2016-06-02       Impact factor: 94.444

5.  DEAD-box helicase 6 (DDX6) is a new negative regulator for milk synthesis and proliferation of bovine mammary epithelial cells.

Authors:  Zhen Zhen; Minghui Zhang; Xiaohan Yuan; Bo Qu; Yanbo Yu; Xuejun Gao; Youwen Qiu
Journal:  In Vitro Cell Dev Biol Anim       Date:  2017-08-25       Impact factor: 2.416

Review 6.  Regulatory mechanisms governing epidermal stem cell function during development and homeostasis.

Authors:  Pooja Flora; Elena Ezhkova
Journal:  Development       Date:  2020-11-15       Impact factor: 6.868

Review 7.  The Interplay between the RNA Decay and Translation Machinery in Eukaryotes.

Authors:  Adam M Heck; Jeffrey Wilusz
Journal:  Cold Spring Harb Perspect Biol       Date:  2018-05-01       Impact factor: 10.005

8.  DDX6 Represses Aberrant Activation of Interferon-Stimulated Genes.

Authors:  Jennifer H Lumb; Qin Li; Lauren M Popov; Siyuan Ding; Marie T Keith; Bryan D Merrill; Harry B Greenberg; Jin Billy Li; Jan E Carette
Journal:  Cell Rep       Date:  2017-07-25       Impact factor: 9.423

9.  Transcriptome-wide stability analysis uncovers LARP4-mediated NFκB1 mRNA stabilization during T cell activation.

Authors:  Yi Tian; Zhouhao Zeng; Xiang Li; Yiyin Wang; Runsen Chen; Sandy Mattijssen; Sergei Gaidamakov; Yuzhang Wu; Richard J Maraia; Weiqun Peng; Jun Zhu
Journal:  Nucleic Acids Res       Date:  2020-09-04       Impact factor: 16.971

Review 10.  Regulation of pluripotency and reprogramming by RNA binding proteins.

Authors:  Dan Li; Mohamed S Kishta; Jianlong Wang
Journal:  Curr Top Dev Biol       Date:  2020-02-25       Impact factor: 4.897

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